Rausch, P.; Basic, M.; Batra, A.; Bischoff, S. C.; Blaut, M.; Clavel, T.; Glasner, J.; Gopalakrishnan, S.; Grassl, G. A.; Gunther, C. et al.; Haller, D.; Hirose, M.; Ibrahim, S.; Loh, G.; Mattner, J.; Nagel, S.; Pabst, O.; Schmidt, F.; Siegmund, B.; Strowig, T.; Volynets, V.; Wirtz, S.; Zeissig, S.; Zeissig, Y.; Bleich, A.; Baines, J. F.: Analysis of factors contributing to variation in the C57BL/6J fecal microbiota across German animal facilities. International Journal of Medical Microbiology 306 (5), S. 343 - 355 (2016)

Lokmer, A.; Künzel, S.; Baines, J. F.; Wegner, a. M.: The role of tissue-specific microbiota in initial establishment success of Pacific oysters. Environmental Microbiology 18 (3), S. 970 - 987 (2016)

Gupta, Y.; Möller, S.; Witte, M.; Belheouane, M.; Sezin, T.; Hirose, M.; Vorobyev, A.; Niesar, F.; Bischof, J.; Ludwig, R. J. et al.; Zillikens, D.; Sadik, C. D.; Restle, T.; Häsler, R.; Baines, J. F.; Ibrahim, S. M.: Dissecting genetics of cutaneous miRNA in a mouse model of an autoimmune blistering disease. BMC Genomics 17, 112 (2016)

Hiergeist, A.; Reischl, U.; Priority Program 1656 Intestinal Microbiota Consortium/ quality assessment participants; Gessner, A.: Multicenter quality assessment of 16S ribosomal DNA-sequencing for microbiome analyses reveals high inter-center variability. International Journal of Medical Microbiology 306 (5), S. 334 - 342 (2016)

Künstner, A.; Hoffmann, M.; Fraser, B.A.; Kottler, V.A.; Sharma, E.; Weigel, D.; Dreyer, C.: The genome of the trinidadian guppy, Poecilia reticulata, and variation in the Guanapo population. PLoS One 11 (12), e0169087 (2016)

Peuker, K.; Muff, S.; Wang, J.; Künzel, S.; Bosse, E.; Zeissig, Y.; Luzzi, G.; Basic, M.; Strigli, A.; Ulbricht, A. et al.; Kaser, A.; Arlt, A.; Chavakis, T.; van den Brink, G. R.; Schafmayer, C.; Egberts, J.-H.; Becker, T.; Bianchi, M. E.; Bleich, A.; Röcken, C.; Hampe, J.; Schreiber, S.; Baines, J. F.; Blumberg, R. S.; Zeissig, S.: Epithelial calcineurin controls microbiota-dependent intestinal tumor development. Nature Medicine 22 (5), S. 506 (2016)

Rehman, A.; Rausch, P.; Wang, J.; Skieceviciene, J.; Kiudelis, G.; Bhagalia, K.; Amarapurkar, D.; Kupcinskas, L.; Schreiber, S.; Rosenstiel, P. et al.; Baines, J. F.; Ott, S.: Geographical patterns of the standing and active human gut microbiome in health and IBD. Gut 65, S. 238 - 248 (2016)

Schrumpf, E.; Kummen, M.; Valestrand, L.; Greiner, T.U.; Holm, K.; Arulampalam, V.; Reims, H.M.; Baines, J.; Bäckhed, F.; Karlsen, T.H. et al.; Blumberg, R.S.; Hov, J.R.; Melum, E.: The gut microbiota contributes to a mouse model of spontaneous bile duct inflammation. Journal of Hepatology 66, S. 382 - 389 (2016)

Theis, K. R.; Dheilly, N. M.; Klassen, J. L.; Brucker, R. M.; Baines, J. F.; Bosch, T. C. G.; Cryan, J. F.; Gilbert, S. F.; Goodnight, C. J.; Lloyd, E. A. et al.; Sapp, J.; Vandenkoornhuyse, P.; Zilber-Rosenberg, I.; Rosenberg, E.; Bordenstein, S. R.: Getting the hologenome concept right: an eco-evolutionary framework for hosts and their microbiomes. mSystems 1 (2), e00028-16 (2016)

Kottler, V. A.; Künstner, A.; Koch, I.; Flötenmeyer, M.; Langenecker, T.; Hoffmann, M.; Sharma, E.; Weigel, D.; Dreyer, C.: Adenylate cyclase 5 is required for melanophore and male pattern development in the guppy (Poecilia reticulata). Pigment Cell & Melanoma Research 28 (5), 12386, S. 545 - 558 (2015)

Weiland-Bräuer, N.; Neulinger, S. C.; Pinnow, N.; Künzel, S.; Baines, J. F.; Schmitz, R. A.: Composition of bacterial communities associated with Aurelia aurita changes with compartment, life stage, and population. Applied and Environmental Microbiology 81 (17), S. 6038 - 6052 (2015)

Kalyan, S.; Wang, J.; Quabius, E. S.; Huck, J.; Wiltfang, J.; Baines, J. F.; Kabelitz, D.: Systemic immunity shapes the oral microbiome and susceptibility to bisphosphonate‑associated osteonecrosis of the jaw. Journal of Translational Medicine 13 (212) (2015)

Rausch, P.; Steck, N.; Suwandi, A.; Seidel, J. A.; Künzel, S.; Bhullar, K.; Basic, M.; Bleich, A.; Johnsen, J. M.; Vallance, B. A. et al.; Baines, J. F.; Grassl, G. A.: Expression of the Blood-Group-Related Gene B4galnt2 Alters Susceptibility to Salmonella Infection. PLoS Pathogens 11 (7), e1005008 (2015)

Kottler, V. A.; Künstner, A.; Schartl, M.: Pheomelanin in fish? Pigment Cell & Melanoma Research 28 (3), S. 355 - 356 (2015)

Huebbe, P.; Dose, J.; Schloesser, A.; Campbell, G.; Glüer, C.-C.; Gupta, Y.; Ibrahim, S.; Minihane, A.-M.; Baines, J. F.; Nebel, A. et al.; Rimbach, G.: Apolipoprotein E (APOE) genotype regulates body weight and fatty acid utilization-Studies in gene-targeted replacement mice. Molecular Nutrition & Food Research 59 (2), S. 334 - 343 (2015)

Fraser, B. A.; Künstner, A.; Reznick, D. N.; Dreyer, C.; Weigel, D.: Population genomics of natural and experimental populations of guppies (Poecilia reticulata). Molecular Ecology 24 (2), S. 389 - 408 (2015)

Vences, M.; Granzow, S.; Künzel, S.; Tebbe, C. C.; Baines, J. F.; Dohrmann, A. B.: Composition and variation of the skin microbiota in sympatric species of European newts (Salamandridae). Amphibia Reptilia 36 (1), S. 5 - 12 (2015)

Wang, J.; Kalyan, S.; Steck, N.; Turner, L. M.; Harr, B.; Künzel, S.; Vallier, M.; Häsler, R.; Franke, A.; Oberg, H.-H. et al.; Ibrahim, S. M.; Grassl, G. A.; Kabelitz, D.; Baines, J. F.: Analysis of intestinal microbiota in hybrid house mice reveals evolutionary divergence in a vertebrate hologenome. Nature Communications 6, 6440 (2015)

Yun, Y.; Srinivas, G.; Künzel, S.; Linnenbrink, M.; Alnahas, S.; Bruce, K. D.; Steinhoff, U.; Baines, J. F.; Schaible, U. E.: Environmentally determined differences in the murine lung microbiota and their relation to alveolar architecture. PLoS One 9 (12), e113466 (2014)

Tschurtschenthaler, M.; Wang, J.; Fricke, C.; Fritz, T. M. J.; Niederreiter, L.; Adolph, T. E.; Sarcevic, E.; Künzel, S.; Offner, F. A.; Kalinke, U. et al.; Baines, J. F.; Tilg, H.; Kaser, A.: Type I interferon signalling in the intestinal epithelium affects Paneth cells, microbial ecology and epithelial regeneration. Gut 63 (12), S. 1921 - 1931 (2014)