Yuan, Z.; Wu, Q.; Xu, L.; Druzhinina, I. S.; Stukenbrock, E. H.; Nieuwenhuis, B. P. S.; Zhong, Z.; Liu, Z.-J.; Wang, X.; Cai, F. et al.; Kubicek, C. P.; Shan, X.; Wang, J.; Shi, G.; Peng, L.; Martin, F. M.: Genomic landscape of a relict fir-associated fungus reveals rapid convergent adaptation towards endophytism. The ISME Journal 16, pp. 1294 - 1305 (2022)

Hassani, M. A.; Oppong-Danquah, E.; Feurtey, A.; Tasdemir, D.; Stukenbrock, E. H.: Differential regulation and production of secondary metabolites among isolates of the fungal wheat pathogen Zymoseptoria tritici. Applied and Environmental Microbiology 88 (6), e02296-21 (2022)

Alizadeh, A.; Javan-Nikkhah, M.; Nourmohammadi Nazarian, R.; Liu, F.; Zare, R.; Fotouhifar, K. B.; Stukenbrock, E. H.; Damm, U.: New species of Colletotrichum from wild Poaceae and Cyperaceae plants in Iran. Mycologia 114, pp. 89 - 113 (2022)

Meteyer, C. U.; Dutheil, J. Y.; Keel, M. K.; Boyles, J. G.; Stukenbrock, E. H.: Plant pathogens provide clues to the potential origin of bat white-nose syndromePseudogymnoascus destructans. Virulence 13 (1), pp. 1020 - 1031 (2022)

Miller, M. E.; Nazareno, E. S.; Rottschaefer, S. M.; Riddle, J.; Dos Santos Pereira, D.; Li, F.; Nguyen-Phuc, H.; Henningsen, E. C.; Persoons, A.; Saunders, D. G. O. et al.; Stukenbrock, E. H.; Dodds, P. N.; Kianian, S. F.; Figueroa, M.: Increased virulence of Puccinia coronata f. sp.avenae populations through allele frequency changes at multiple putative Avr loci. PLoS Genetics 16 (12), e1009291 (2021)

Filatova, S.; Claassen, B.; Torres, G.; Krause-Kyora, B.; Stukenbrock, E. H.; Kirleis, W.: Toward an investigation of diversity and cultivation of rye (Secale cereale ssp. cereale L.) in Germany: methodological insights and first results from early modern plant material. Agronomy 11, 2451 (2021)

Habig, M.; Lorrain, C.; Feurtey, A.; Komluski, J.: Epigenetic modifications affect the rate of spontaneous mutations in a pathogenic fungus. Nature Communications 12, 5869 (2021)

Spanner, R.; Taliadoros, D.; Richards, J.; Rivera-Varas, V.; Neubauer, J.; Natwick, M.; Hamilton, O.; Vaghefi, N.; Pethybridge, S.; Secor, G. A. et al.; Friesen, T. L.; Stukenbrock, E. H.; Bolton, M. D.: Genome-wide association and selective sweep studies reveal the complex genetic architecture of DMI fungicide resistance in Cercospora beticola. Genome Biology and Evolution 13 (9), evab209 (2021)

Pereira, D.; Oggenfuss, U.; McDonald, B. A.; Crol, D.: Population genomics of transposable element activation in the highly repressive genome of an agricultural pathogen. Microbial Genomics 7, 000540 (2021)

Boynton, P. J.; Wloch-Salamon, D.; Landermann, D.; Stukenbrock, E. H.: Forest Saccharomyces paradoxus are robust to seasonal biotic and abiotic changes. Ecology and Evolution 11 (11), pp. 6604 - 6619 (2021)

Soyer, J. L.; Clairet, C.; Gay, E. J.; Lapalu, N.; Rouxel, T.; Stukenbrock, E. H.; Fudal, I.: Genome-wide mapping of histone modifications in two species of Leptosphaeria maculans showing contrasting genomic organization and host specialization. Chromosome Research 29, pp. 219 - 236 (2021)

Lorrain, C.; Feurtey, A.; Möller, M.; Haueisen, J.; Stukenbrock, E. H.: Dynamics of transposable elements in recently diverged fungal pathogens: lineage-specific transposable element content and efficiency of genome defences. G3: Genes, Genomes, Genetics 11 (4), jkab068 (2021)

Soluch, R.; Hülter, N. F.; Romero Picazo, D.; Özkurt, E.; Stukenbrock, E. H.; Dagan, T.: Colonization dynamics of Pantoea agglomeransin the wheat root habitat. Environmental Microbiology 23, pp. 2260 - 2273 (2021)

Vasighzadeh, A.; Sharifnabi, B.; Javan-Nikkhah, M.; Seifollahi, E.; Landermann-Habetha, D.; Feurtey, A.; Holtgrewe-Stukenbrock, E.: Population genetic structure of four regional populations of the barley pathogen Pyrenophora teres f. maculata in Iran is characterized by high genetic diversity and sexual recombination. Plant Pathology 70 (3), pp. 735 - 744 (2021)

Möller, M.; Habig, M.; Lorrain, C.; Feurtey, A.; Haueisen, J.; Fagundes, W. C.; Alizadeh, A.; Freitag, M.; Stukenbrock, E. H.: Recent loss of the Dim2 DNA methyltransferase decreases mutation rate in repeats and changes evolutionary trajectory in a fungal pathogen. PLoS Genetics 17 (3), e1009448 (2021)

Ebert, M. K.; Rangel, L. I.; Spanner, R. E.; Taliadoros, D.; Wang, X.; Friesen, T. L.; de Jonge, R.; Neubauer, J. D.; Secor, G. A.; Thomma, B. P. H. J. et al.; Stukenbrock, E. H.; Bolton, M. D.: Identification and characterization of Cercospora beticola necrosis-inducing effector CbNip1. Molecular Plant Pathology 22 (3), pp. 301 - 316 (2021)

Croll, D.; Crous, P.W.; Pereira, D.; Mordecai, E.A.; McDonald, B.A.; Brunner, P.C.: Genome-scale phylogenies reveal relationships among Parastagonospora species infecting domesticated and wild grasses. Persoonia 46, pp. 116 - 128 (2021)

Habig, M.; Schotanus, K.; Hufnagel, K.; Happel, P.; Stukenbrock, E. H.: AGO1 affects the virulence of the fungal plant pathogen Zymoseptoria tritici. Genes 12 (7), 1011 (2021)

Özkurt, E.; Hassani, M. A.; Sesiz, U.; Künzel, S.; Dagan, T.; Özkan, H.; Stukenbrock, E. H.: Seed-derived microbial colonization of wild emmer and domesticated bread wheat (Triticum dicoccoidesandt. Aestivum) seedlings shows pronounced differences in overall diversity and composition. mBio 11 (6), e02637-20 (2020)

Feurtey, A.; Guitton, E.; De Gracia Coquerel, M.; Duvaux, L.; Shiller, J.; Bellanger, M.-N.; Expert, P.; Sannier, M.; Caffier, V.; Giraud, T. et al.; Le Cam, B.; Lemaire, C.: Threat to Asian wild apple trees posed by gene flow from domesticated apple trees and their “pestified” pathogens. Molecular Ecology 29 (24), pp. 4925 - 4941 (2020)