Publications of John F. Baines

Journal Article (116)

81.
Journal Article
Rausch, P.; Steck, N.; Suwandi, A.; Seidel, J. A.; Künzel, S.; Bhullar, K.; Basic, M.; Bleich, A.; Johnsen, J. M.; Vallance, B. A. et al.; Baines, J. F.; Grassl, G. A.: Expression of the Blood-Group-Related Gene B4galnt2 Alters Susceptibility to Salmonella Infection. PLoS Pathogens 11 (7), e1005008 (2015)
82.
Journal Article
Huebbe, P.; Dose, J.; Schloesser, A.; Campbell, G.; Glüer, C.-C.; Gupta, Y.; Ibrahim, S.; Minihane, A.-M.; Baines, J. F.; Nebel, A. et al.; Rimbach, G.: Apolipoprotein E (APOE) genotype regulates body weight and fatty acid utilization-Studies in gene-targeted replacement mice. Molecular Nutrition & Food Research 59 (2), pp. 334 - 343 (2015)
83.
Journal Article
Vences, M.; Granzow, S.; Künzel, S.; Tebbe, C. C.; Baines, J. F.; Dohrmann, A. B.: Composition and variation of the skin microbiota in sympatric species of European newts (Salamandridae). Amphibia Reptilia 36 (1), pp. 5 - 12 (2015)
84.
Journal Article
Wang, J.; Kalyan, S.; Steck, N.; Turner, L. M.; Harr, B.; Künzel, S.; Vallier, M.; Häsler, R.; Franke, A.; Oberg, H.-H. et al.; Ibrahim, S. M.; Grassl, G. A.; Kabelitz, D.; Baines, J. F.: Analysis of intestinal microbiota in hybrid house mice reveals evolutionary divergence in a vertebrate hologenome. Nature Communications 6, 6440 (2015)
85.
Journal Article
Yun, Y.; Srinivas, G.; Künzel, S.; Linnenbrink, M.; Alnahas, S.; Bruce, K. D.; Steinhoff, U.; Baines, J. F.; Schaible, U. E.: Environmentally determined differences in the murine lung microbiota and their relation to alveolar architecture. PLoS One 9 (12), e113466 (2014)
86.
Journal Article
Tschurtschenthaler, M.; Wang, J.; Fricke, C.; Fritz, T. M. J.; Niederreiter, L.; Adolph, T. E.; Sarcevic, E.; Künzel, S.; Offner, F. A.; Kalinke, U. et al.; Baines, J. F.; Tilg, H.; Kaser, A.: Type I interferon signalling in the intestinal epithelium affects Paneth cells, microbial ecology and epithelial regeneration. Gut 63 (12), pp. 1921 - 1931 (2014)
87.
Journal Article
Wang, J.; Linnenbrink, M.; Künzel, S.; Fernandes, R.; Nadeau, M.-J.; Rosenstiel, P.; Baines, J. F.: Dietary history contributes to enterotype-like clustering and functional metagenomic content in the intestinal microbiome of wild mice. Proceedings of the National Academy of Sciences of the United States of America 111 (26), pp. E2703 - E2710 (2014)
88.
Journal Article
Langfeldt, D.; Neulinger, S. C.; Heuer, W.; Staufenbiel, I.; Künzel, S.; Baines, J. F.; Eberhard, J.; Schmitz, R. A.: Composition of microbial oral biofilms during aturation in young healthy adults. PLoS One 9 (2), e87449 (2014)
89.
Journal Article
Wang, J.; Kuenzel, S.; Baines, J. F.: Draft genome sequences of 11 Staphylococcus epidermidis strains isolated from wild mouse species. Genome Announcements 2 (1), e01148-13 (2014)
90.
Journal Article
Fink, C.; Staubach, F.; Künzel, S.; Baines, J. F.; Roeder, T.: Noninvasive analysis of microbiome dynamics in the fruit fly Drosophila melanogaster. Applied and Environmental Microbiology 79 (22), pp. 6984 - 6988 (2013)
91.
Journal Article
Franzenburg, S.; Walter, J.; Künzel, S.; Wang, J.; Baines, J. F.; Bosch, T. C. G.; Fraune, S.: Distinct antimicrobial peptide expression determines host species-specific bacterial associations. Proceedings of the National Academy of Sciences of the United States of America 110 (39), pp. E3730 - E3738 (2013)
92.
Journal Article
Srinivas, G.; Möller, S.; Wang, J.; Künzel, S.; Zillikens, D.; Baines, J. F.; Ibrahim, S. M.: Genome-wide mapping of gene–microbiota interactions in susceptibility to autoimmune skin blistering. Nature Communications 4, 2462 (2013)
93.
Journal Article
Staubach, F.; Baines, J. F.; Künzel, S.; Bik, E. M.; Petrov, D. A.: Host species and environmental effects on bacterial communities associated with Drosophila in the laboratory and in the natural environment. PLoS ONE 8 (8), e70749 (2013)
94.
Journal Article
Lachnit, T.; Fischer, M.; Künzel, S.; Baines, J. F.; Harder, T.: Compounds associated with algal surfaces mediate epiphytic colonization of the marine macroalga Fucus vesiculosus. FEMS Microbiology Ecology 84 (2), pp. 411 - 420 (2013)
95.
Journal Article
Linnenbrink, M.; Wang, J.; Hardouin, E. A.; Künzel, S.; Metzler, D.; Baines, J. F.: The role of biogeography in shaping diversity of the intestinal microbiota in house mice. Molecular Ecology 22 (7), pp. 1904 - 1916 (2013)
96.
Journal Article
Franzenburg, S.; Fraune, S.; Altrock, P. M.; Künzel, S.; Baines, J. F.; Traulsen, A.; Bosch, T. C.: Bacterial colonization of Hydra hatchlings follows a robust temporal pattern. The ISME Journal 7 (4), pp. 781 - 790 (2013)
97.
Journal Article
Franzenburg, S.; Fraune, S.; Künzel, S.; Baines, J. F.; Domazet-Lošo, T.; Bosch, T. C. G.: MyD88-deficient Hydra reveal an ancient function of TLR signaling in sensing bacterial colonizers. Proceedings of the National Academy of Sciences of the United States of America 109 (47), pp. 19374 - 19379 (2012)
98.
Journal Article
Folseraas, T.; Melum, E.; Rausch, P.; Juran, B. D.; Ellinghaus, E.; Shiryaev, A.; Laerdahl, J. K.; Ellinghaus, D.; Schramm, C.; Weismüller, T. J. et al.; Gotthardt, D. N.; Hov, J. R.; Clausen, O. P.; Weersma, R. K.; Janse, M.; Boberg, K. M.; Björnsson, E.; Marschall, H. -.; Cleynen, I.; Rosenstiel, P.; Holm, K.; Teufel, A.; Rust, C.; Gieger, C.; Wichmann, H.-E.; Bergquist, A.; Ryu, E.; Ponsioen, C. Y.; Runz, H.; Sterneck, M.; Vermeire, S.; Beuers, U.; Wijmenga, C.; Schrumpf, E.; Manns, M. P.; Lazaridis, K. N.; Schreiber, S.; Baines, J. F.; Franke, A.; Karlsen, T. H.: Extended analysis of a genome-wide association study in primary sclerosing cholangitis detects multiple novel risk loci. Journal of Hepatology 57 (2), pp. 366 - 375 (2012)
99.
Journal Article
Staubach, F.; Künzel, S.; Baines, A. C.; Yee, A.; McGee, B. M.; Bäckhed, F.; Baines, J. F.; Johnsen, J. M.: Expression of the blood-group-related glycosyltransferase B4galnt2 influences the intestinal microbiota in mice. ISME JOURNAL 6 (7), pp. 1345 - 1355 (2012)
100.
Journal Article
Rausch, P.; Rehman, A.; Künzel, S.; Häsler, R.; Ott, S. J.; Schreiber, S.; Rosenstiel, P.; Franke, A.; Baines, J. F.: Colonic mucosa-associated microbiota is influenced by an interaction of Crohn disease and FUT2 (Secretor) genotype. Proceedings of the National Academy of Sciences of the United States of America 108 (47), pp. 19030 - 19035 (2011)
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