Miller, M. E.; Nazareno, E. S.; Rottschaefer, S. M.; Riddle, J.; Dos Santos Pereira, D.; Li, F.; Nguyen-Phuc, H.; Henningsen, E. C.; Persoons, A.; Saunders, D. G. O. et al.; Stukenbrock, E. H.; Dodds, P. N.; Kianian, S. F.; Figueroa, M.: Increased virulence of Puccinia coronata f. sp.avenae populations through allele frequency changes at multiple putative Avr loci. PLoS Genetics 16 (12), e1009291 (2021)

Filatova, S.; Claassen, B.; Torres, G.; Krause-Kyora, B.; Stukenbrock, E. H.; Kirleis, W.: Toward an investigation of diversity and cultivation of rye (Secale cereale ssp. cereale L.) in Germany: methodological insights and first results from early modern plant material. Agronomy 11, 2451 (2021)

Habig, M.; Lorrain, C.; Feurtey, A.; Komluski, J.: Epigenetic modifications affect the rate of spontaneous mutations in a pathogenic fungus. Nature Communications 12, 5869 (2021)

Spanner, R.; Taliadoros, D.; Richards, J.; Rivera-Varas, V.; Neubauer, J.; Natwick, M.; Hamilton, O.; Vaghefi, N.; Pethybridge, S.; Secor, G. A. et al.; Friesen, T. L.; Stukenbrock, E. H.; Bolton, M. D.: Genome-wide association and selective sweep studies reveal the complex genetic architecture of DMI fungicide resistance in Cercospora beticola. Genome Biology and Evolution 13 (9), evab209 (2021)

Pereira, D.; Oggenfuss, U.; McDonald, B. A.; Crol, D.: Population genomics of transposable element activation in the highly repressive genome of an agricultural pathogen. Microbial Genomics 7, 000540 (2021)

Boynton, P. J.; Wloch-Salamon, D.; Landermann, D.; Stukenbrock, E. H.: Forest Saccharomyces paradoxus are robust to seasonal biotic and abiotic changes. Ecology and Evolution 11 (11), pp. 6604 - 6619 (2021)

Soyer, J. L.; Clairet, C.; Gay, E. J.; Lapalu, N.; Rouxel, T.; Stukenbrock, E. H.; Fudal, I.: Genome-wide mapping of histone modifications in two species of Leptosphaeria maculans showing contrasting genomic organization and host specialization. Chromosome Research 29, pp. 219 - 236 (2021)

Lorrain, C.; Feurtey, A.; Möller, M.; Haueisen, J.; Stukenbrock, E. H.: Dynamics of transposable elements in recently diverged fungal pathogens: lineage-specific transposable element content and efficiency of genome defences. G3: Genes, Genomes, Genetics 11 (4), jkab068 (2021)

Soluch, R.; Hülter, N. F.; Romero Picazo, D.; Özkurt, E.; Stukenbrock, E. H.; Dagan, T.: Colonization dynamics of Pantoea agglomeransin the wheat root habitat. Environmental Microbiology 23, pp. 2260 - 2273 (2021)

Vasighzadeh, A.; Sharifnabi, B.; Javan-Nikkhah, M.; Seifollahi, E.; Landermann-Habetha, D.; Feurtey, A.; Holtgrewe-Stukenbrock, E.: Population genetic structure of four regional populations of the barley pathogen Pyrenophora teres f. maculata in Iran is characterized by high genetic diversity and sexual recombination. Plant Pathology 70 (3), pp. 735 - 744 (2021)

Möller, M.; Habig, M.; Lorrain, C.; Feurtey, A.; Haueisen, J.; Fagundes, W. C.; Alizadeh, A.; Freitag, M.; Stukenbrock, E. H.: Recent loss of the Dim2 DNA methyltransferase decreases mutation rate in repeats and changes evolutionary trajectory in a fungal pathogen. PLoS Genetics 17 (3), e1009448 (2021)

Ebert, M. K.; Rangel, L. I.; Spanner, R. E.; Taliadoros, D.; Wang, X.; Friesen, T. L.; de Jonge, R.; Neubauer, J. D.; Secor, G. A.; Thomma, B. P. H. J. et al.; Stukenbrock, E. H.; Bolton, M. D.: Identification and characterization of Cercospora beticola necrosis-inducing effector CbNip1. Molecular Plant Pathology 22 (3), pp. 301 - 316 (2021)

Croll, D.; Crous, P.W.; Pereira, D.; Mordecai, E.A.; McDonald, B.A.; Brunner, P.C.: Genome-scale phylogenies reveal relationships among Parastagonospora species infecting domesticated and wild grasses. Persoonia 46, pp. 116 - 128 (2021)

Habig, M.; Schotanus, K.; Hufnagel, K.; Happel, P.; Stukenbrock, E. H.: AGO1 affects the virulence of the fungal plant pathogen Zymoseptoria tritici. Genes 12 (7), 1011 (2021)

Lorrain, C.; Oggenfuss, U.; Croll, D.; Duplessis, S.; Stukenbrock, E.: Transposable elements in fungi: coevolution with the host genome shapes, genome architecture, plasticity and adaptation. In: Encyclopedia of Mycology, Vol. 1, pp. 142 - 155 (Eds. Zaragoza, Ó.; Casadevall, A.). Elsevier (2021)

Thynne, E.; Kettles, G. J.; Stukenbrock, E. H.: Identification of novel immune-suppressing effectors from the wheat pathogen Zymoseptoria tritici. IS-MPMI Congress: eSymposia: Molecular Mechanism & Structure—Zooming in on Plant Immunity, online, July 12, 2021 - July 13, 2021. MPMI 34 (7S), p. S1.9 - S1.9 (2021)

Potgieter, L.: Population genomics of Cercospora beticola. Dissertation, 221 pp., Christian-Albrechts-Universität, Kiel (2021)