Week, B.; Russell, S. L.; Schulenburg, H.; Bohannan, B. J. M.; Bruijning, M.: Applying evolutionary theory to understand host–microbiome evolution. Nature Ecology & Evolution 00 (00), s41559-025-02846-w (2025)

Petersen, C.; Griem‐Krey, H.; Christophersen, C. M.; Schulenburg, H.; Habig, M.: The interaction between the nematode Caenorhabditis elegans and its coexisting fungal microbiome member Barnettozyma californica. Environmental Microbiology Reports 17 (4), e70177 (2025)

Tueffers, L.; Batra, A.; Zimmermann, J.; Botelho, J.; Buchholz, F.; Junqi, L.; Mejíae, N. M.; Munder, A.; Klockgether, J.; Tümmler, B. et al.; Rupp, J.; Schulenburg, H.: Variation in the response to antibiotics and life-history across the major Pseudomonas aeruginosa clone type (mPact) panel. Microbiology Spectrum 12 (7), e00143-24 (2024)

Zimmermann, J.; Piecyk, A.; Sieber, M.; Petersen, C.; Johnke, J.; Moitinho-Silva, L.; Künzel, S.; Bluhm, L.; Traulsen, A.; Kaleta, C. et al.; Schulenburg, H.: Gut-associated functions are favored during microbiome assembly across C. elegans life. mBio 15 (5), e00012-24 (2024)

von Hoyningen-Huene, A. J. E.; Bang, C.; Rausch, P.; Rühlemann, M.; Fokt, H.; He, J.; Jensen, N.; Knop, M.; Petersen, C.; Schmittmann, L. et al.; Zimmer, T.; Baines, J. F.; Bosch, T. C. G.; Hentschel, U.; Reusch, T. B. H.; Roeder, T.; Franke, A.; Schulenburg, H.; Stukenbrock, E.; Schmitz, R. A.: The archaeome in metaorganism research, with a focus on marine models and their bacteria–archaea interactions. Frontiers in Microbiology 15, 1347422 (2024)

Marinos, G.; Hamerich, I. K.; Debray, R.; Obeng, N.; Petersen, C.; Taubenheim, J.; Zimmermann, J.; Blackburn, D.; Samuel, B. S.; Dierking, K. et al.; Franke, A.; Laudes, M.; Waschina, S.; Schulenburg, H.; Kaleta, C.: Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics. Microbiology Spectrum 12, e01144-23 (2024)

Obeng, N.; Czerwinski, A.; Schütz, D.; Michels, J.; Leipert, J.; Bansept, F.; Schultheiß, T.; Kemlein, M.; Fuß, J.; Tholey, A. et al.; Traulsen, A.; Schulenburg, H.: Bacterial c-di-GMP has a key role in establishing host–microbe symbiosis. Nature Microbiology 8, S. 1809 - 1819 (2023)

Botelho, J.; Tüffers, L.; Fuss, J.; Buchholz, F.; Utpatel, C.; Klockgether, J.; Niemann, S.; Tümmler, B.; Schulenburg, H.: Phylogroup-specific variation shapes the clustering of antimicrobial resistance genes and defence systems across regions of genome plasticity in Pseudomonas aeruginosa. EBioMedicine 90, 104532 (2023)

Bozzaro, C.; Rupp, J.; Stolpe, M.; Schulenburg, H.: Das gute Leben heute und morgen: Antibiotikaresistente Keime als Nachhaltigkeitsproblem in der Medizin. Ethik in der Medizin 35, S. 111 - 123 (2023)

Han, K. Y.; Kröger, L.; Buchholz, F.; Dewan, I.; Quaas, M.; Schulenburg, H.; Reusch, T. B.H.: The economics of microbiodiversity. Ecological Economics 204 (Part A), 107664 (2023)

Botelho, J.; Cazares, A.; Schulenburg, H.: The ESKAPE mobilome contributes to the spread of antimicrobial resistance and CRISPR-mediated conflict between mobile genetic elements. Nucleic Acids Research (London) 51 (1), S. 236 - 252 (2023)

Griem-Krey, H.; Petersen, C.; Hamerich, I. K.; Schulenburg, H.: The intricate triangular interaction between protective microbe, pathogen and host determines fitness of the metaorganism. Proceedings of the Royal Society B: Biological Sciences 290, 20232193 (2023)

Petersen, C.; Hamerich, I. K.; Adair, K. L.; Griem-Krey, H.; Torres Oliva, M.; Hoeppner, M. P.; Bohannan, B. J. M.; Schulenburg, H.: Host and microbiome jointly contribute to environmental adaptation. The ISME Journal 17, S. 1953 - 1965 (2023)

Hall, J. P. J.; Botelho, J.; Cazares, A.; Baltrus, D. A.: What makes a megaplasmid? Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 377 (1842), 20200472 (2022)

Snoek, B. L.; Sterken, M. G.; Nijveen, H.; Volkers, R. J. M.; Riksen, J.; Rosenstiel, P. C.; Schulenburg, H.; Kammenga, J. E.: The genetics of gene expression in a Caenorhabditis elegans multiparental recombinant inbred line population. G3: Genes, Genomes, Genetics 11 (10), jkab258 (2021)

Zárate-Potes, A.; Yang, W.; Andresen, B.; Nakad, R.; Haase, D.; Rosenstiel, P.; Dierking, K.; Schulenburg, H.: The effects of nested miRNAs and their host genes on immune defense against Bacillus thuringiensis infection in Caenorhabditis elegans. Developmental & Comparative Immunology 123, 104144 (2021)

Obeng, N.; Bansept, F.; Sieber, M.; Traulsen, A.; Schulenburg, H.: Evolution of microbiota–host associations: the microbe’s perspective. Trends in Microbiology 29 (9), S. 779 - 787 (2021)

Batra, A.; Römhild, R.; Rousseau, E.; Franzenburg, S.; Niemann, S.; Schulenburg, H.: High potency of sequential therapy with only β-lactam antibiotics. eLife 10, e68876 (2021)

Pees, B.; Yang, W.; Kloock, A.; Petersen, C.; Peters, L.; Fan, L.; Friedrichsen, M.; Butze, S.; Zárate-Potes, A.; Schulenburg, H. et al.; Dierking, K.: Effector and regulator: diverse functions of C. elegans C-type lectin-like domain proteins. PLoS Pathogens 17, e1009454 (2021)

Sieber, M.; Traulsen, A.; Schulenburg, H.; Douglas, A. E.: On the evolutionary origins of host–microbe associations. Proceedings of the National Academy of Sciences 118 (9), e2016487118 (2021)