Publications from IMPRS Doctoral Researchers

Escamilla-Vega, E.; Seton, L. W. G.; Kyomen, S.; Murillo-Rincón, A. P.; Petersen, J.; Tautz, D.; Kaucká, M.: Evolution of the essential geneMN1during the macroevolutionary transition toward patterning the vertebrate hindbrain. Proceedings of the National Academy of Sciences of the United States of America 122 (22), e2416061122 (2025)

Damatac, A.; Koska, S.; Ullrich, K. K.; Domazet-Lošo, T.; Klimovich, A.; Kaucká, M.: Evolutionary trends in the emergence of skeletal cell types. Evolution Letters 00 (00), qraf012 (2025)

Fic, M.; Bastian, F.; Miękisz, J.; Gokhale, C. S.: Compartment model of strategy-dependent time delays in replicator dynamics. Journal of Theoretical Biology 601, 112044 (2025)

Ishigohoka, J.; Liedvogel, M.: High-recombining genomic regions affect demography inference based on ancestral recombination graphs. Genetics 229 (3), iyaf004 (2025)

Riley, E. P.; Lyda, J. A.; Reyes-Matte, O.; Sugie, J.; Kasu, I. R.; Enustun, E.; Armbruster, E. G.; Ravishankar, S.; Isaacson, R. L.; Camp, A. H. et al.; López-Garrido, J.; Pogliano, K.: Developmentally regulated proteolysis by MdfA and ClpCP mediates metabolic differentiation duringBacillus subtilissporulation. Genes & Development 39, pp. 524 - 537 (2025)

Morison, C.; Fic, M.; Marcou, T.; Mohamadichamgavi, J.; Antón, J. R.; Sayyar, G.; Stein, A.; Bastian, F.; Krakovská, H.; Krishnan, N. et al.; Pires, D. L.; Satouri, M.; Thomsen, F. J.; Tjikundi, K.; Ali, W.: Public goods games in disease evolution and spread. Dynamic Games and Applications 00 (00) (2025)

Peralta, C. M.; Feunteun, E.; Guillaudeau, J.; Briševac, D.; Kaiser, T. S.: How light at night sets the circalunar clock in the Marine midgeclunio Marinus. Journal of Biological Rhythms 40 (1), pp. 91 - 110 (2025)

Rossetti, C. S. L.; Hauser, O. P.; Hilbe, C.: Dynamics of cooperation in concurrent games. Nature Communications 16, 1524 (2025)

Vieira Mourato, B.; Haubold, B.: Fast detection of unique genomic regions. Computational and Structural Biotechnology Journal 27, pp. 843 - 850 (2025)

Giaimo, S.; Shah, S.; Raatz, M.; Traulsen, A.: Negligible long-term impact of nonlinear growth dynamics on heterogeneity in models of cancer cell populations. Bulletin of mathematical biology 87 (2), 18 (2025)

Habich, A.; Chaves Vargas, V.; Robinson, L. A.; Allsopp, L. E.; Unterweger, D.: Distribution of the four type VI secretion systems in Pseudomonas aeruginosa and classification of their core and accessory effectors. Nature Communications 16, 888 (2025)

Parab, L.; Romeyer Dherbey, J.; Rivera, N.; Schwarz, M.; Gallie, J.; Bertels, F.: Chloramphenicol and gentamicin reduce the evolution of resistance to phage ΦX174 by suppressing a subset of E. coli LPS mutants. PLOS Biology 23 (1), e3002952 (2025)

Vieira Mourato, B.; Haubold, B.: Detection and annotation of unique regions in mammalian genomes. G3: Genes, Genomes, Genetics 15 (1), jkae257 (2025)

Ngan, W. Y.; Parab, L. S.; Bertels, F.; Gallie, J.: A more significant role for insertion sequences in large-scale rearrangements in bacterial genomes. mBio 16 (1), e03052-24 (2024)

Aldrovandi, S.; Fajardo Castro, J.; Ullrich, K.; Karger, A.; Luria, V.; Tautz, D.: Expression of random sequences and de novo evolved genes from the mouse in human cells reveals functional diversity and specificity. Genome Biology and Evolution 16 (12), evae175 (2024)

Ishigohoka, J.; Bascón-Cardozo, K.; Bours, A.; Fuß, J.; Rhie, A.; Mountcastle, J.; Haase, B.; Chow, W.; Collins, J.; Howe, K. et al.; Uliano-Silva, M.; Fedrigo, O.; Jarvis, E. D.; Pérez-Tris, J.; Illera, J. C.; Liedvogel, M.: Distinct patterns of genetic variation at low-recombining genomic regions represent haplotype structure. Evolution: International Journal of Organic Evolution 78 (12), pp. 1916 - 1935 (2024)

Tarvin, R. D.; Coleman, J. L.; Donoso, D. A.; Betancourth-Cundar, M.; López-Hervas, K.; Gleason, K. S.; Sanders, J. R.; Smith, J. M.; Ron, S. R.; Santos, J. C. et al.; Sedio, B. E.; Cannatella, D. C.; Fitch, R. W.: Passive accumulation of alkaloids in inconspicuously colored frogs refines the evolutionary paradigm of acquired chemical defenses. eLife 13, RP100011 (2024)

Bonive-Boscan, A.; Acosta, H.; Rojas, A.: Metabolic changes that allow Plasmodium falciparum artemisinin-resistant parasites to tolerate the oxidative stress. Frontiers in Parasitology 3, 1461641 (2024)

Neumann, J.; Rajendra, D.; Kaiser, T. S.: The free-running Circasemilunar period is determined by counting circadian clock cycles in the Marine midgeclunio Marinus. Journal of Biological Rhythms 39 (4), pp. 323 - 391 (2024)

Nyhoegen, C.; Bonhoeffer, S.; Uecker, H.: The many dimensions of combination therapy: How to combine antibiotics to limit resistance evolution. Evolutionary Applications 17 (8), e13764 (2024)