Publications from IMPRS Doctoral Researchers

Fic, M.; Bastian, F.; Miękisz, J.; Gokhale, C. S.: Compartment model of strategy-dependent time delays in replicator dynamics. Journal of Theoretical Biology 601, 112044 (2025)

Ishigohoka, J.; Liedvogel, M.: High-recombining genomic regions affect demography inference based on ancestral recombination graphs. Genetics 229 (3), iyaf004 (2025)

Riley, E. P.; Lyda, J. A.; Reyes-Matte, O.; Sugie, J.; Kasu, I. R.; Enustun, E.; Armbruster, E. G.; Ravishankar, S.; Isaacson, R. L.; Camp, A. H. et al.; López-Garrido, J.; Pogliano, K.: Developmentally regulated proteolysis by MdfA and ClpCP mediates metabolic differentiation duringBacillus subtilissporulation. Genes & Development 39, pp. 524 - 537 (2025)

Morison, C.; Fic, M.; Marcou, T.; Mohamadichamgavi, J.; Antón, J. R.; Sayyar, G.; Stein, A.; Bastian, F.; Krakovská, H.; Krishnan, N. et al.; Pires, D. L.; Satouri, M.; Thomsen, F. J.; Tjikundi, K.; Ali, W.: Public goods games in disease evolution and spread. Dynamic Games and Applications 00 (00) (2025)

Peralta, C. M.; Feunteun, E.; Guillaudeau, J.; Briševac, D.; Kaiser, T. S.: How light at night sets the circalunar clock in the Marine midgeclunio Marinus. Journal of Biological Rhythms 40 (1), pp. 91 - 110 (2025)

Rossetti, C. S. L.; Hauser, O. P.; Hilbe, C.: Dynamics of cooperation in concurrent games. Nature Communications 16, 1524 (2025)

Vieira Mourato, B.; Haubold, B.: Fast detection of unique genomic regions. Computational and Structural Biotechnology Journal 27, pp. 843 - 850 (2025)

Giaimo, S.; Shah, S.; Raatz, M.; Traulsen, A.: Negligible long-term impact of nonlinear growth dynamics on heterogeneity in models of cancer cell populations. Bulletin of mathematical biology 87 (2), 18 (2025)

Habich, A.; Chaves Vargas, V.; Robinson, L. A.; Allsopp, L. E.; Unterweger, D.: Distribution of the four type VI secretion systems in Pseudomonas aeruginosa and classification of their core and accessory effectors. Nature Communications 16, 888 (2025)

Parab, L.; Romeyer Dherbey, J.; Rivera, N.; Schwarz, M.; Gallie, J.; Bertels, F.: Chloramphenicol and gentamicin reduce the evolution of resistance to phage ΦX174 by suppressing a subset of E. coli LPS mutants. PLOS Biology 23 (1), e3002952 (2025)

Vieira Mourato, B.; Haubold, B.: Detection and annotation of unique regions in mammalian genomes. G3: Genes, Genomes, Genetics 15 (1), jkae257 (2025)

Ngan, W. Y.; Parab, L. S.; Bertels, F.; Gallie, J.: A more significant role for insertion sequences in large-scale rearrangements in bacterial genomes. mBio 16 (1), e03052-24 (2024)

Aldrovandi, S.; Fajardo Castro, J.; Ullrich, K.; Karger, A.; Luria, V.; Tautz, D.: Expression of random sequences and de novo evolved genes from the mouse in human cells reveals functional diversity and specificity. Genome Biology and Evolution 16 (12), evae175 (2024)

Ishigohoka, J.; Bascón-Cardozo, K.; Bours, A.; Fuß, J.; Rhie, A.; Mountcastle, J.; Haase, B.; Chow, W.; Collins, J.; Howe, K. et al.; Uliano-Silva, M.; Fedrigo, O.; Jarvis, E. D.; Pérez-Tris, J.; Illera, J. C.; Liedvogel, M.: Distinct patterns of genetic variation at low-recombining genomic regions represent haplotype structure. Evolution: International Journal of Organic Evolution 78 (12), pp. 1916 - 1935 (2024)

Tarvin, R. D.; Coleman, J. L.; Donoso, D. A.; Betancourth-Cundar, M.; López-Hervas, K.; Gleason, K. S.; Sanders, J. R.; Smith, J. M.; Ron, S. R.; Santos, J. C. et al.; Sedio, B. E.; Cannatella, D. C.; Fitch, R. W.: Passive accumulation of alkaloids in inconspicuously colored frogs refines the evolutionary paradigm of acquired chemical defenses. eLife 13, RP100011 (2024)

Bonive-Boscan, A.; Acosta, H.; Rojas, A.: Metabolic changes that allow Plasmodium falciparum artemisinin-resistant parasites to tolerate the oxidative stress. Frontiers in Parasitology 3, 1461641 (2024)

Neumann, J.; Rajendra, D.; Kaiser, T. S.: The free-running Circasemilunar period is determined by counting circadian clock cycles in the Marine midgeclunio Marinus. Journal of Biological Rhythms 39 (4), pp. 323 - 391 (2024)

Nyhoegen, C.; Bonhoeffer, S.; Uecker, H.: The many dimensions of combination therapy: How to combine antibiotics to limit resistance evolution. Evolutionary Applications 17 (8), e13764 (2024)

Vieira Mourato, B.; Tsers, I.; Denker, S.; Klötzl, F.; Haubold, B.: Marker discovery in the large. Bioinformatics advances 4 (1), vbae113 (2024)

Gorshkova, E.; Kyomen, S.; Kaucká, M.; Guenther, A.: Food quality influences behavioural flexibility and cognition in wild house mice. Scientific Reports 14, 16088 (2024)