Publications of Julien Y. Dutheil

Dutheil, J. Y.: On the estimation of genome-average recombination rates. Genetics 227 (2), iyae051 (2024)

Langebrake, C.; Manthey, G.; Lugo Ramos, J. S.; Dutheil, J. Y.; Chetverikova, R.; Solov'yov, I.; Mouritsen, H.; Liedvogel, M.: Adaptive evolution and loss of a putative magnetoreceptor in passerines. Proceedings of the Royal Society B: Biological Sciences 291 (2016), 0232308 (2024)

Dutheil, J. Y.; Hamidi, D.; Pajot, B.: The Site/Group Extended Data format and tools. Genome Biology and Evolution 16 (2), evae011 (2024)

Bascón-Cardozo, K.; Bours, A.; Manthey, G.; Pruisscher, P.; Durieux, G.; Dutheil, J. Y.; Odenthal-Hesse, L.; Liedvogel, M.: Fine-scale map reveals highly variable recombination rates associated with genomic features in the European blackcap. Genome Biology and Evolution 16 (1), evad233 (2024)

Rivas-González, I.; Rousselle, M.; Li, F.; Zhou, L.; Dutheil, J. Y.; Munch, K.; Shao, Y.; Wu, D.; Schierup, M. H.; Zhang, G.: Pervasive incomplete lineage sorting illuminates speciation and selection in primates. Science 380, 925 (2023)

Raas, M. W. D.; Dutheil, J. Y.: The rate of adaptive molecular evolution in wild and domesticated Saccharomyces cerevisiae populations. Molecular Ecology 00 (00), pp. 1 - 21 (2023)

Barroso, G.; Dutheil, J. Y.: The landscape of nucleotide diversity in Drosophila melanogaster is shaped by mutation rate variation. Peer Community Journal 3, e40 (2023)

Puzović, N.; Madaan, T.; Dutheil, J. Y.: Being noisy in a crowd: differential selective pressure on gene expression noise in model gene regulatory networks. PLoS Computational Biology 19 (4), e1010982 (2023)

Moutinho, A. F.; Eyre-Walker, A.; Dutheil, J. Y.: Strong evidence for the adaptive walk model of gene evolution in Drosophila and Arabidopsis. PLoS Biology 20 (9), e3001775 (2022)

Chaurasia, S.; Dutheil, J. Y.: The structural determinants of intra-protein compensatory substitutions. Molecular Biology and Evolution 39 (4), msac063 (2022)

Meteyer, C. U.; Dutheil, J. Y.; Keel, M. K.; Boyles, J. G.; Stukenbrock, E. H.: Plant pathogens provide clues to the potential origin of bat white-nose syndromePseudogymnoascus destructans. Virulence 13 (1), pp. 1020 - 1031 (2022)

Schweizer, G.; Haider, M. B.; Barroso, G. V.; Rossel, N.; Munch, K.; Kahmann, R.; Dutheil, J. Y.: Population genomics of the maize pathogen Ustilago maydis: demographic history and role of virulence clusters in adaptation. Genome Biology and Evolution 13 (5), evab073 (2021)

Dutheil, J. Y.; Münch, K.; Schotanus, K.; Stukenbrock, E. H.; Kahmann, R.: The insertion of a mitochondrial selfish element into the nuclear genome and its consequences. Ecology and Evolution 10 (20), pp. 11117 - 11132 (2020)

Moutinho, A. F.; Bataillon, T.; Dutheil, J. Y.: Variation of the adaptive substitution rate between species and within genomes. Evolutionary Ecology 34 (3), pp. 315 - 338 (2020)

Potgieter, L.; Feurtey, A.; Dutheil, J. Y.; Stukenbrock, E. H.: On variant discovery in genomes of fungal plant pathogens. Frontiers in Microbiology 11, 626 (2020)

Barroso, G.; Puzović, N.; Dutheil, J. Y.: Inference of recombination maps from a single pair of genomes and its application to ancient samples. PLoS Genetics 15 (11), e1008449 (2019)

Moutinho, A. F.; Trancoso, F. F.; Dutheil, J. Y.: The impact of protein architecture on adaptive evolution. Molecular Biology and Evolution 36 (9), pp. 2013 - 2028 (2019)

Grandaubert, J.; Dutheil, J. Y.; Stukenbrock, E. H.: The genomic determinants of adaptive evolution in a fungal pathogen. Evolution Letters 3 (3), pp. 299 - 312 (2019)

Barroso, G. V.; Puzovic, N.; Dutheil, J. Y.: Inference of recombination maps from a single pair of genomes and its application to archaic samples. PLoS Genetics 15 (11), e1008449 (2019)

Stukenbrock, E. H.; Dutheil, J. Y.: Fine-scale recombination maps of fungal plant pathogens reveal dynamic recombination landscapes and intragenic hotspots. Genetics 208 (3), pp. 1209 - 1229 (2018)