To explore the genetics of invasive Cottus, we apply massively parallel sequencing, genetic mapping, transciptomics and population genetic analyses. Ancestry informative markers and linkage information are used in population genetic studies of the makeup of the invasive Cottus gene pool. We collaborate with Prof. Dr. Floyd Reed (University of Hawaii, USA) to model the evolution genomic ancestry in hybrid species to derive predictions that can be tested in Cottus. Dr. Fritz Sedlazek and Prof. Dr. Arndt von Haeseler (both University of Vienna, Austria) develop mapping algorithms and software that can map next generation sequencing reads to distant reference genomes. We are collaborating to efficiently map Cottus genomic sequences directly onto the stickleback (Gasterosteus) genome and to develop analysis approaches to study population genomics of hybrid Cottus.
We are interested to document evolution in natural habitats. However, we keep fishes for breeding experiments, genetic mapping and for studies of gene expression in controlled environments. This requires aquaria with a constant supply of fresh water. We can simulate the natural light and temperature cycle and are able to breed Cottus in our fish facilities at the Max-Planck Institute in Plön.