Publications of Kristian K. Ullrich

Journal Article (40)

21.
Journal Article
Perroud, P.-F.; Haas, F. B.; Hiss, M.; Ullrich, K. K.; Alboresi, A.; Amirebrahimi, M.; Barry, K.; Bassi, R.; Bonhomme, S.; Chen, H. et al.; Coates, J. C.; Fujita, T.; Guyon-Debast, A.; Lang, D.; Lin, J.; Lipzen, A.; Nogué, F.; Oliver, M. J.; de Léon, I. P.; Quatrano, R. S.; Rameau, C.; Reiss, B.; Reski, R.; Ricca, M.; Saidi, Y.; Sun, N.; Szövenyi, P.; Sreedasyam, A.; Grimwood, J.; Stacey, G.; Schmutz, J.; Rensing, a. S. A.: The Physcomitrella patens gene atlas project: large-scale RNA-seq based expression data. The Plant Journal 95 (1), pp. 168 - 182 (2018)
22.
Journal Article
Schmitz, J. F.; Ullrich, K. K.; Bornberg-Bauer, E.: Incipient de novo genes can evolve from frozen accidents that escaped rapid transcript turnover. Nature Ecology & Evolution 2 (10), pp. 1626 - 1632 (2018)
23.
Journal Article
Weston, D. J.; Turetsky, M. R.; Johnson, M. G.; Granath, G.; Lindo, Z.; Belyea, L. R.; Rice, S. K.; Hanson, D. T.; Engelhardt, K. A. M.; Schmutz, J. et al.; Dorrepaal, E.; Euskirchen, E. S.; Stenøien, H. K.; Szövényi, P.; Jackson, M.; Piatkowski, B. T.; Muchero, W.; Norby, R. J.; Kostka, J. E.; Glass, J. B.; Rydin, H.; Limpens, J.; Tuittila, E.-S.; Ullrich, K. K.; Carrell, A.; Benscoter, B. W.; Chen, J.-G.; Oke, T. A.; Nilsson, M. B.; Ranjan, P.; Jacobson, D.; Lilleskov, E. A.; Clymo, R. S.; Shaw, A. J.: The Sphagnome Project: enabling ecological and evolutionary insights through a genus-level sequencing project. New Phytologist 217 (1), pp. 16 - 25 (2018)
24.
Journal Article
Richards, C. L.; Alonso, C.; Becker, C.; Bossdorf, O.; Bucher, E.; Colomé-Tatché, M.; Durka, W.; Engelhardt, J.; Gaspar, B.; Gogol-Döring, A. et al.; Grosse, I.; van Gurp, T. P.; Heer, K.; Kronholm, I.; Lampei, C.; Latzel, V.; Mirouze, M.; Opgenoorth, L.; Paun, O.; Prohaska, S. J.; Rensing, S. A.; Stadler, P. F.; Trucchi, E.; Ullrich, K.; Verhoeven, K. J. F.: Ecological plant epigenetics: Evidence from model and non-model species, and the way forward. Ecology Letters 20 (12), pp. 1576 - 1590 (2017)
25.
Journal Article
Wilhelmsson, P. K. I.; Mühlich, C.; Ullrich, K. K.; Rensing, S. A.: Comprehensive genome-wide classification reveals that many plant-specific transcription factors evolved in streptophyte algae. Genome Biology and Evolution 9 (12), pp. 3384 - 3397 (2017)
26.
Journal Article
Szövényi, P.; Ullrich, K. K.; Rensing, S. A.; Lang, D.; van Gessel, N.; Stenøien, H. K.; Conti, E.; Reski, R.: Selfing in haploid plants and efficacy of selection: codon usage bias in the model moss Physcomitrella patens. Genome Biology and Evolution 9 (1), pp. 1528 - 1546 (2017)
27.
Journal Article
Hiss, M.; Meyberg, R.; Westermann, J.; Haas, F. B.; Schneider, L.; Schallenberg-Reudinger, M.; Ullrich, K. K.; Rensing, S. A.: Sexual reproduction, sporophyte development and molecularvariation in the model moss Physcomitrella patens: introducing the ecotype Reute. The Plant Journal 90 (3), pp. 606 - 620 (2017)
28.
Journal Article
Dahlke, R. I.; Fraas, S.; Ullrich, K. K.; Heinemann, K.; Romeiks, M.; Rickmeyer, T.; Klebe, G.; Palme, K.; Lüthen, H.; Steffens, B.: Protoplast swelling and hypocotyl growth depend on different auxin signaling pathways. Plant Physiology 175 (2), pp. 982 - 994 (2017)
29.
Journal Article
Hiss, M.; Schneider, L.; Grosche, C.; Barth, M. A.; Neu, C.; Symeonidi, A.; Ullrich, K. K.; Perroud, P.-F.; Schallenberg-Rüdinger, M.; Rensing, S. A.: Combination of the endogenous lhcsr1 promoter and codon usage optimization boosts protein expression in the Moss Physcomitrella patens. Frontiers in Plant Science 8, 1842 (2017)
30.
Journal Article
Roschanski, A. M.; Csillery, K.; Liepelt, S.; Oddou-Muratorio, S.; Ziegenhagen, B.; Huard, F.; Ullrich, K. K.; Postolache, D.; Vendramin, G. G.; Fady, B.: Evidence of divergent selection for drought and cold tolerance at landscape and local scales in Abies alba Mill. in the French Mediterranean Alps. Molecular Ecology 25 (3), pp. 776 - 794 (2016)
31.
Journal Article
Heer, K.; Ullrich, K. K.; Liepelt, S.; Rensing, S. A.; Zhou, J.; Ziegenhagen, B.; Opgenoorth, L.: Detection of SNPs based on transcriptome sequencing in Norway spruce (Picea abies (L.) Karst). Conservation Genetics Resources 8 (2), pp. 105 - 107 (2016)
32.
Journal Article
Moog, D.; Rensing, S. A.; Archibald, J. M.; Maier, U. G.; Ullrich, K. K.: Localization and evolution of putative triose phosphate translocators in the Diatom Phaeodactylum tricornutum. Genome Biology and Evolution 7 (11), pp. 2955 - 2969 (2015)
33.
Journal Article
Raschke, A.; Ibanez, C.; Ullrich, K. K.; Anwer, M. U.; Becker, S.; Glockner, A.; Trenner, J.; Denk, K.; Saal, B.; Sun, X. et al.; Ni, M.; Davis, S. J.; Delker, C.; Quint, M.: Natural variants of ELF3 affect thermomorphogenesis by transcriptionally modulating PIF4-dependent auxin response genes. BMC Plant Biology 15 (197) (2015)
34.
Journal Article
Ullrich, K. K.; Hiss, M.; Rensing, S. A.: Means to optimize protein expression in transgenic plants. Current Opinion in Biotechnology 32, pp. 61 - 7 (2015)
35.
Journal Article
Ranjan, A.; Dickopf, S.; Ullrich, K. K.; Rensing, S. A.; author, U. H.: Functional analysis of COP1 and SPA orthologs from Physcomitrella and rice during photomorphogenesis of transgenic Arabidopsis reveals distinct evolutionary conservation. BMC Plant Biology 14 (178) (2014)
36.
Journal Article
Poeschl, Y.; Delker, C.; Trenner, J.; Ullrich, K. K.; Quint, M.; Grosse, I.: Optimized probe masking for comparative transcriptomics of closely related species. PLoS One 8, e78497 (2013)
37.
Journal Article
Quint, M.; Drost, H.-G.; Gabel, A.; Ullrich, K. K.; Bönn, M.; Grosse, I.: A transcriptomic hourglass in plant embryogenesis. Nature 490, pp. 98 - 101 (2012)
38.
Journal Article
Janitza, P.; Ullrich, K. K.; Quint, M.: Toward a comprehensive phylogenetic reconstruction of the evolutionary history of mitogen-activated protein kinases in the plant kingdom. Frontiers in Plant Science 3, p. 271 (2012)
39.
Journal Article
Schumann, N.; Navarro-Quezada, A.; Ullrich, K. K.; Kuhl, C.; Quint, M.: Molecular evolution and selection patterns of plant F-box proteins with C-terminal kelch repeats. Plant Physiology 155 (2), pp. 835 - 850 (2011)
40.
Journal Article
Delker, C.; Poschl, Y.; Raschke, A.; Ullrich, K. K.; Ettingshausen, S.; Hauptmann, V.; Grosse, I.; Quint, M.: Natural variation of transcriptional auxin response networks in Arabidopsis thaliana. Plant Cell 22 (7), pp. 2184 - 2200 (2010)
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