Journal Article (124)

1.
Journal Article
Ma, Y.; Liu, X.; Zhang, X.; Yu, Y.; Li, Y.; Song, M.; Wang, jun, J.: Efficient mining of anticancer peptides from gut metagenome. Advanced Science 10 (25), 2300107 (2023)
2.
Journal Article
Bonczarowska, J. H.; Susat, J.; Krause-Kyora, B.; Dangvard Pedersen, D.; Boldsen, J.; Larsen, L. A.; Seeberg, L.; Nebel, A.; Unterweger, D.: Ancient Yersinia pestis genomes lack the virulence-associated YpfΦ prophage present in modern pandemic strains. Proceedings of the Royal Society B: Biological Sciences 290 (2003), 20230622 (2023)
3.
Journal Article
Pontarollo, G.; Kollar, B.; Mann, A.; Khuu, M. P.; Kiouptsi, K.; Bayer, F.; Brandão, I.; Zinina, V. V.; Hahlbrock, J.; Malinarich, F. et al.; Mimmler, M.; Bhushan, S.; Marini, F.; Ruf, W.; Belheouane, M.; Baines, J. F.; Endres, K.; Reba, S. M.; Raker, V. K.; Deppermann, C.; Welsch, C.; Bosmann, M.; Soshnikova, N.; Chassaing, B.; Bergentall, M.; Sommer, F.; Bäckhed, F.; Reinhardt, C.: Commensal bacteria weaken the intestinal barrier by suppressing epithelial neuropilin-1 and Hedgehog signaling. Nature Metabolism 5, pp. 1174 - 1187 (2023)
4.
Journal Article
Chung, C. J.; Hermes, B.-M.; Gupta, Y.; Ibrahim, S.; Belheouane, M.; Baines, J. F.: Genome-wide mapping of gene-microbe interactions in the murine lung microbiota based on quantitative microbial profiling. Animal Microbiome 5, 31 (2023)
5.
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Vallier, M.; Segurens, B.; Larsonneur, E.; Meyer, V.; Ferreira, S.; Caloustian, C.; Deleuze, J.-F.; Dougados, M.; Chamaillard, M.; Miceli-Richard, C.: Characterisation of gut microbiota composition in patients with axial spondyloarthritis and its modulation by TNF inhibitor treatment. RMD Open 9 (1), e002794 (2023)
6.
Journal Article
Ma, Y.; He, J.; Sieber, M.; von Frieling, J.; Bruchhaus, I.; Baines, J. F.; Bickmeyer, U.; Roeder, T.: The microbiome of the marine flatworm Macrostomum lignano provides fitness advantages and exhibits circadian rhythmicity. Communications Biology 6, 289 (2023)
7.
Journal Article
Belheouane, M.; Hermes, B. M.; Van Beek, N.; Benoit, S.; Bernard, P.; Drenovska, K.; Gerdes, S.; Gläser, R.; Goebeler, M.; Günther, C. et al.; von Georg, A.; Hammers, C. M.; Holtsche, M. M.; Homey, B.; Horváth, O. N.; Hübner, F.; Linnemann, B.; Joly, P.; Márton, D.; Patsatsi, A.; Pföhler, C.; Sárdy, M.; Huilaja, L.; Vassileva, S.; Zillikens, D.; Ibrahim, S.; Sadik, C. D.; Schmidt, E.; Baines, J. F.: Characterization of the skin microbiota in bullous pemphigoid patients and controls reveals novel microbial indicators of disease. Journal of advanced research: JAR 44, pp. 71 - 79 (2023)
8.
Journal Article
Lucchini, R.; Carraro, L.; Pauletto, M.; Gallo, M.; Andreani, N. A.; Weiss, G.; Tessaro, C.; Babbucci, M.; Cardazzo, B.: Molecular typing and genome sequencing allow the identification of persistent Listeria monocytogenes strains and the tracking of the contamination source in food environments. International Journal of Food Microbiology 386, 110025 (2023)
9.
Journal Article
Münkler, P.; Klatt, N.; Scherschel, K.; Kuklik, P.; Jungen, C.; Cavus, E.; Eickholt, C.; Christoph, J.; Lemoine, M. D.; Christ, T. et al.; Willems, S.; Riedel, R.; Kirchhof, P.; Meyer, C.: Repolarization indicates electrical instability in ventricular arrhythmia originating from papillary muscle. EP Europace 25 (2), pp. 688 - 697 (2023)
10.
Journal Article
Borges, A. S. G.; Basu, M.; Brinks, E.; Bang, C.; Cho, G.-S.; Baines, J. F.; Franke, A.; Franz, C. M. A. P.: Fast identification method for screening bacteria from faecal samples using Oxford Nanopore Technologies MinION sequencing. Current Microbiology 80, 101 (2023)
11.
Journal Article
Vallier, M.; Suwandi, A.; Ehrhardt, K.; Belheouane, M.; Berry, D.; Čepić, A.; Galeev, A.; Johnsen, J. M.; Grassl, G. A.; Baines, J. F.: Pathometagenomics reveals susceptibility to intestinal infection by Morganella to be mediated by the blood group-related B4galnt2 gene in wild mice. Gut Microbes 15 (1), 2164448 (2023)
12.
Journal Article
Bonczarowska, J. H.; Susat, J.; Mühlemann, B.; Jasch-Boley, I.; Brather, S.; Höke, B.; Brather-Walter, S.; Schoenenberg, V.; Scheschkewitz, J.; Graenert, G. et al.; Krausse, D.; Francken, M.; Jones, T. C.; Wahl, J.; Nebel, A.; Krause-Kyora, B.: Pathogen genomics study of an early medieval community in Germany reveals extensive co-infections. Genome Biology 23, 250 (2022)
13.
Journal Article
Hermes, B. M.; Rademacher, F.; Chung, C.; Tiegs, G.; Bendix, M.-C.; de Zwaan, M.; Harder, J.; Baines, J. F.: Skin microbiota analysis in patients with anorexia nervosa and healthy-weight controls reveals microbial indicators of healthy weight and associations with the antimicrobial peptide psoriasin. Scientific Reports 12, 15515 (2022)
14.
Journal Article
Suwandi, A.; Alvarez, K. G.; Galeev, A.; Steck, N.; Riedel, C. U.; Puente, J. L.; Baines, J. F.; Grassl, G. A.: B4galnt2-mediated host glycosylation influences the susceptibility to Citrobacter rodentium infection. Frontiers in Microbiology 13, 980495 (2022)
15.
Journal Article
Doms, S.; Fokt, H.; Rühlemann, M. C.; Chung, C. J.; Künstner, A.; Ibrahim, S. M.; Franke, A.; Turner, L. M.; Baines, J. F.: Key features of the genetic architecture and evolution of host-microbe interactions revealed by high-resolution genetic mapping of the mucosa-associated gut microbiome in hybrid mice. eLife 11, e75419 (2022)
16.
Journal Article
Unni, R.; Pintor, K. L.; Diepold, A.; Unterweger, D.: Presence and absence of type VI secretion systems in bacteria. Microbiology 168 (4), 001151 (2022)
17.
Journal Article
Schofield, B.J.; Andreani, N. A.; Günther, C.S.; Law, G.R.; McMahon, G.; Swainson, M.; Goddard, M.R.: Livestock microbial landscape patterns: retail poultry microbiomes significantly vary by region and season. Food Microbiology 101, 103878 (2022)
18.
Journal Article
Fokt, H.; Unni, R.; Repnik, U.; Schmitz, R. A.; Bramkamp, M.; Baines, J. F.; Unterweger, D.: Bacteroides muris sp. nov. isolated from the cecum of wild-derived house mice. Archives of Microbiology 204 (9), 546 (2022)
19.
Journal Article
Gröbner, E.-M.; Zeiler, M.; Fischmeister, F. P. S.; Kollndorfer, K.; Schmelz, S.; Schneider, A.; Haid-Stecher, N.; Sevecke, K.; Wagner, G.; Keller, L. et al.; Adan, R.; Danner, U.; van Elburg, A.; van der Vijgh, B.; Kooij, K. L.; Fetissov, S.; Andreani, N. A.; Baines, J. F.; Dempfle, A.; Seitz, J.; Herpertz-Dahlmann, B.; Karwautz, A.: The effects of probiotics administration on the gut microbiome in adolescents with anorexia nervosa—A study protocol for a longitudinal, double-blind, randomized, placebo-controlled trial. European Eating Disorders Review 30 (1), pp. 61 - 74 (2022)
20.
Journal Article
Henneke, L.; Schlicht, K.; Andreani, N. A.; Hollstein, T.; Demetrowitsch, T.; Knappe, C.; Hartmann, K.; Jensen-Kroll, J.; Rohmann, N.; Pohlschneider, D. et al.; Geisler, C.; Schulte, D. M.; Settgast, U.; Türk, K.; Zimmermann, J.; Kaleta, C.; Baines, J. F.; Shearer, J.; Shah, S.; Shen-Tu, G.; Schwarz, K.; Franke, A.; Schreiber, S.; Laudes, M.: A dietary carbohydrate–gut Parasutterella–human fatty acid biosynthesis metabolic axis in obesity and type 2 diabetes. Gut Microbes 14 (1), e2057778 (2022)
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