Publications of John F. Baines

Weiland-Bräuer, N.; Neulinger, S. C.; Pinnow, N.; Künzel, S.; Baines, J. F.; Schmitz, R. A.: Composition of bacterial communities associated with Aurelia aurita changes with compartment, life stage, and population. Applied and Environmental Microbiology 81 (17), pp. 6038 - 6052 (2015)

Kalyan, S.; Wang, J.; Quabius, E. S.; Huck, J.; Wiltfang, J.; Baines, J. F.; Kabelitz, D.: Systemic immunity shapes the oral microbiome and susceptibility to bisphosphonate‑associated osteonecrosis of the jaw. Journal of Translational Medicine 13 (212) (2015)

Rausch, P.; Steck, N.; Suwandi, A.; Seidel, J. A.; Künzel, S.; Bhullar, K.; Basic, M.; Bleich, A.; Johnsen, J. M.; Vallance, B. A. et al.; Baines, J. F.; Grassl, G. A.: Expression of the Blood-Group-Related Gene B4galnt2 Alters Susceptibility to Salmonella Infection. PLoS Pathogens 11 (7), e1005008 (2015)

Huebbe, P.; Dose, J.; Schloesser, A.; Campbell, G.; Glüer, C.-C.; Gupta, Y.; Ibrahim, S.; Minihane, A.-M.; Baines, J. F.; Nebel, A. et al.; Rimbach, G.: Apolipoprotein E (APOE) genotype regulates body weight and fatty acid utilization-Studies in gene-targeted replacement mice. Molecular Nutrition & Food Research 59 (2), pp. 334 - 343 (2015)

Vences, M.; Granzow, S.; Künzel, S.; Tebbe, C. C.; Baines, J. F.; Dohrmann, A. B.: Composition and variation of the skin microbiota in sympatric species of European newts (Salamandridae). Amphibia Reptilia 36 (1), pp. 5 - 12 (2015)

Wang, J.; Kalyan, S.; Steck, N.; Turner, L. M.; Harr, B.; Künzel, S.; Vallier, M.; Häsler, R.; Franke, A.; Oberg, H.-H. et al.; Ibrahim, S. M.; Grassl, G. A.; Kabelitz, D.; Baines, J. F.: Analysis of intestinal microbiota in hybrid house mice reveals evolutionary divergence in a vertebrate hologenome. Nature Communications 6, 6440 (2015)

Yun, Y.; Srinivas, G.; Künzel, S.; Linnenbrink, M.; Alnahas, S.; Bruce, K. D.; Steinhoff, U.; Baines, J. F.; Schaible, U. E.: Environmentally determined differences in the murine lung microbiota and their relation to alveolar architecture. PLoS One 9 (12), e113466 (2014)

Tschurtschenthaler, M.; Wang, J.; Fricke, C.; Fritz, T. M. J.; Niederreiter, L.; Adolph, T. E.; Sarcevic, E.; Künzel, S.; Offner, F. A.; Kalinke, U. et al.; Baines, J. F.; Tilg, H.; Kaser, A.: Type I interferon signalling in the intestinal epithelium affects Paneth cells, microbial ecology and epithelial regeneration. Gut 63 (12), pp. 1921 - 1931 (2014)

Wang, J.; Linnenbrink, M.; Künzel, S.; Fernandes, R.; Nadeau, M.-J.; Rosenstiel, P.; Baines, J. F.: Dietary history contributes to enterotype-like clustering and functional metagenomic content in the intestinal microbiome of wild mice. Proceedings of the National Academy of Sciences of the United States of America 111 (26), pp. E2703 - E2710 (2014)

Langfeldt, D.; Neulinger, S. C.; Heuer, W.; Staufenbiel, I.; Künzel, S.; Baines, J. F.; Eberhard, J.; Schmitz, R. A.: Composition of microbial oral biofilms during aturation in young healthy adults. PLoS One 9 (2), e87449 (2014)

Wang, J.; Kuenzel, S.; Baines, J. F.: Draft genome sequences of 11 Staphylococcus epidermidis strains isolated from wild mouse species. Genome Announcements 2 (1), e01148-13 (2014)

Fink, C.; Staubach, F.; Künzel, S.; Baines, J. F.; Roeder, T.: Noninvasive analysis of microbiome dynamics in the fruit fly Drosophila melanogaster. Applied and Environmental Microbiology 79 (22), pp. 6984 - 6988 (2013)

Franzenburg, S.; Walter, J.; Künzel, S.; Wang, J.; Baines, J. F.; Bosch, T. C. G.; Fraune, S.: Distinct antimicrobial peptide expression determines host species-specific bacterial associations. Proceedings of the National Academy of Sciences of the United States of America 110 (39), pp. E3730 - E3738 (2013)

Srinivas, G.; Möller, S.; Wang, J.; Künzel, S.; Zillikens, D.; Baines, J. F.; Ibrahim, S. M.: Genome-wide mapping of gene–microbiota interactions in susceptibility to autoimmune skin blistering. Nature Communications 4, 2462 (2013)

Staubach, F.; Baines, J. F.; Künzel, S.; Bik, E. M.; Petrov, D. A.: Host species and environmental effects on bacterial communities associated with Drosophila in the laboratory and in the natural environment. PLoS ONE 8 (8), e70749 (2013)

Lachnit, T.; Fischer, M.; Künzel, S.; Baines, J. F.; Harder, T.: Compounds associated with algal surfaces mediate epiphytic colonization of the marine macroalga Fucus vesiculosus. FEMS Microbiology Ecology 84 (2), pp. 411 - 420 (2013)

Linnenbrink, M.; Wang, J.; Hardouin, E. A.; Künzel, S.; Metzler, D.; Baines, J. F.: The role of biogeography in shaping diversity of the intestinal microbiota in house mice. Molecular Ecology 22 (7), pp. 1904 - 1916 (2013)

Franzenburg, S.; Fraune, S.; Altrock, P. M.; Künzel, S.; Baines, J. F.; Traulsen, A.; Bosch, T. C.: Bacterial colonization of Hydra hatchlings follows a robust temporal pattern. The ISME Journal 7 (4), pp. 781 - 790 (2013)

Franzenburg, S.; Fraune, S.; Künzel, S.; Baines, J. F.; Domazet-Lošo, T.; Bosch, T. C. G.: MyD88-deficient Hydra reveal an ancient function of TLR signaling in sensing bacterial colonizers. Proceedings of the National Academy of Sciences of the United States of America 109 (47), pp. 19374 - 19379 (2012)

Folseraas, T.; Melum, E.; Rausch, P.; Juran, B. D.; Ellinghaus, E.; Shiryaev, A.; Laerdahl, J. K.; Ellinghaus, D.; Schramm, C.; Weismüller, T. J. et al.; Gotthardt, D. N.; Hov, J. R.; Clausen, O. P.; Weersma, R. K.; Janse, M.; Boberg, K. M.; Björnsson, E.; Marschall, H. -.; Cleynen, I.; Rosenstiel, P.; Holm, K.; Teufel, A.; Rust, C.; Gieger, C.; Wichmann, H.-E.; Bergquist, A.; Ryu, E.; Ponsioen, C. Y.; Runz, H.; Sterneck, M.; Vermeire, S.; Beuers, U.; Wijmenga, C.; Schrumpf, E.; Manns, M. P.; Lazaridis, K. N.; Schreiber, S.; Baines, J. F.; Franke, A.; Karlsen, T. H.: Extended analysis of a genome-wide association study in primary sclerosing cholangitis detects multiple novel risk loci. Journal of Hepatology 57 (2), pp. 366 - 375 (2012)