Publications of Frederic Bertels
All genres
Journal Article (19)
1.
Journal Article
121 (11), e2309263121 (2024)
Rapid dissemination of host-metabolism-manipulating transposon-like entities via integrative and conjugative elements. PNAS 2.
Journal Article
40 (7), msad154 (2023)
Stepwise evolution of E. coli C and ΦX174 reveals unexpected Lipopolysaccharide (LPS) diversity. Molecular Biology and Evolution 3.
Journal Article
3, e19 (2023)
RAREFAN: A webservice to identify REPINs and RAYTs in bacterial genomes. Peer Community Journal 4.
Journal Article
45 (2), 2200085 (2023)
Ancient Darwinian replicators nested within eubacterial genomes. Bioessays 5.
Journal Article
377 (1842), 20200477 (2022)
Transposable elements promote the evolution of genome streamlining. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 6.
Journal Article
1, e4 (2021)
Convergent evolution as an indicator for selection during acute HIV-1 infection. Peer Community Journal 7.
Journal Article
217 (7), iyab027 (2021)
How sequence populations persist inside bacterial genomes. Genetics 8.
Journal Article
36 (11), pp. 2400 - 2414 (2019)
Parallel evolution of HIV-1 in a long-term experiment. Molecular Biology and Evolution 9.
Journal Article
36 (5), pp. 1071 - 1085 (2019)
Repeated phenotypic evolution by different genetic routes in Pseudomonas fluorescens SBW25. Molecular Biology and Evolution 10.
Journal Article
4 (2), vey029 (2018)
Estimating the mutational fitness effects distribution during early HIV infection. Virus Evolution 11.
Journal Article
9 (8), pp. 2110 - 2121 (2017)
Identification and characterization of domesticated bacterial transposases. Genome Biology and Evolution 12.
Journal Article
206 (4), pp. 2149 - 2157 (2017)
Discovering complete quasispecies in bacterial genomes. Genetics 13.
Journal Article
30 (10), pp. 813 - 828 (2017)
Recombination of virulence genes in divergent acidovorax avenae strains that infect a common host. Molecular Plant-Microbe Interactions 14.
Journal Article
13 (3), e1002109 (2015)
Bistability in a metabolic network underpins the De Novo Evolution of colony switching in Pseudomonas fluorescens. PLoS Biology 15.
Journal Article
31 (5), pp. 1077 - 1088 (2014)
Automated reconstruction of whole-genome phylogenies from short-sequence reads. Molecular Biology and Evolution 16.
Journal Article
195 (4), pp. 1319 - 1335 (2013)
Adaptive divergence in experimental populations of Pseudomonas fluorescens. V. Insight into the niche specialist fuzzy spreader compels revision of the model Pseudomonas radiation. Genetics 17.
Journal Article
9 (7), e1003503 (2013)
Genomic analysis of the kiwifruit pathogen Pseudomonas syringae pv. actnidiae provides insight into the origins of an emergent plant disease. PLoS Pathogens 18.
Journal Article
7 (6), e1002132 (2011)
Within-genome evolution of REPINs: a new familiy of miniature mobile DNA in bacteria. PLoS Genetics 19.
Journal Article
1 (4), pp. 262 - 268 (2011)
Curiosities of REPINs and RAYTs. Mobile genetic elements Talk (1)
20.
Talk
RAREFAN: a publicly accessible bioinformatic pipeline on a cloud server - Implementation and limitations. Workshop on "Life Science/Bioinformatics and HPC 2023, at GWDG (2023)