Journal Article (27)
21.
Journal Article
6 (5), e18155 (2011)
Estimating parameters of speciation models based on refined summaries of the joint site-frequency spectrum. PLoS ONE 22.
Journal Article
27 (4), pp. 449 - 455 (2011)
Alignment-free estimation of nucleotide diversity. Bioinformatics 23.
Journal Article
19 (1), pp. 277 - 284 (2010)
mlRho – a program for estimating the population mutation and recombination rates from shotgun-sequenced diploid genomes. Molecular Ecology 24.
Journal Article
19 (1), pp. 162 - 175 (2010)
Nucleotide divergence vs. gene expression differentiation: comparative transcriptome sequencing in natural isolates from the carrion crow and its hybrid zone with the hooded crow. Molecular Ecology 25.
Journal Article
25 (24), pp. 3221 - 3227 (2009)
Efficient estimation of pairwise distances between genomes. Bioinformatics 26.
Journal Article
182 (1), pp. 205 - 216 (2009)
The impact of sampling schemes on the site frequency spectrum in nonequilibrium subdivided populations. Genetics 27.
Journal Article
16 (10), pp. 1487 - 1500 (2009)
Estimating mutation distances from unaligned genomes. Journal of Computational Biology Book (2)
28.
Book
Bioinformatics for Evolutionary Biologists: a problems approach. Springer, Cham (2023), IX, 411 pp.
29.
Book
Bioinformatics for evolutionary biologists: a problems approach. Springer International Publishing, Cham (2017), X, 318 pp.
Book Chapter (1)
30.
Book Chapter
2242, (Chapter 6), pp. 77 - 89 (Eds. Mengoni, A.; Bacci, G.; Fondi, M.). Springer US, New York, NY (2021)
Fast phylogeny reconstruction from genomes of closely related microbes. In: Bacterial Pangenomics: Methods in Molecular Biology, Vol. Conference Report (2)
31.
Conference Report
Making campus bridging work for researchers: a case study with mlRho. In: Proceedings of the Conference on Extreme Science and Engineering Discovery Environment: Gateway to Discovery. XSEDE '13 (Ed. Wilkins-Diehr, N.). Extreme Science and Engineering Discovery Environment: Gateway to Discovery, San Diego, CA, USA, July 22, 2013 - July 25, 2013. Association for Computing Machinery, New York, NY, USA (2013)
32.
Conference Report
An alignment-free distance measure for closely related genomes. In: Comparative genomics: international workshop, RECOMB-CG 2008, Paris, France, October 13-15, 2008 ; Proceedings, pp. 87 - 99 (Eds. Nelson, C. E.; Vialette, S.). RECOMB Workshop on Comparative Genomics, Paris, October 13, 2008 - October 15, 2008. Springer, Berlin, Heidelberg (2008)
Thesis - PhD (2)
33.
Thesis - PhD
Fast computation of genome distances. Dissertation, xv, 95 pp., Universität zu Lübeck. Institut für Neuro- und Bioinformatik., Lübeck (2020)
34.
Thesis - PhD
Algorithms for efficient alignment-free sequence comparison. Dissertation, University of Zagreb, Zagreb (2010)
Thesis - Master (7)
35.
Thesis - Master
Fast multiple sequence alignment. Master, ix, 45 pp., Universität zu Lübeck, Institut für Neuro- und Bioinformatik, Lübeck (2022)
36.
Thesis - Master
Funktion und Komplexität in Wirbeltiergenomen. Master, 53 pp., Universität zu Lübeck, Institut für Neuro- und Bioinformatik, Lübeck (2018)
37.
Thesis - Master
Estimation of recombination rates from population genetics data in Daphnia pulex. Master, 136 pp., Universität zu Lübeck, Institut für Neuro- und Bioinformatik, Lübeck (2018)
38.
Thesis - Master
A method for single nucleotide polymorphism calling in diploid individuals. Master, 47 pp., Universität zu Lübeck, Institut für Neuro- und Bioinformatik, Lübeck (2017)
39.
Thesis - Master
Entwicklung einer Methode zur Berechnung von Distanzen zwischen Mikrobien. Master, 46 pp., Universität zu Lübeck, Institut für Mathematik, Lübeck (2017)
40.
Thesis - Master
Efficient estimation of evolutionary distances. Master, 63 pp., Universität zu Lübeck, Institut für Neuro- und Bioinformatik, Lübeck (2015)