Publications of John F. Baines

Journal Article (116)

101.
Journal Article
Linnenbrink, M.; Johnsen, J. M.; Montero, I.; Brzezinski, C. R.; Harr, B.; Baines, J. F.: Long-term balancing selection at the blood group-related gene B4galnt2 in the genus Mus (Rodentia; Muridae). Molecular Biology and Evolution 28 (11), pp. 2999 - 3003 (2011)
102.
Journal Article
Rehman, A.; Sina, C.; Gavrilova, O.; Häsler, R.; Ott, S.; Baines, J. F.; Schreiber, S.; Rosenstiel, P.: Nod2 is essential for temporal development of intestinal microbial communities. Gut 60 (10), pp. 1354 - 1362 (2011)
103.
Journal Article
Johnsen, J. M.; Teschke, M.; Pavlidis, P.; McGee, B. M.; Tautz, D.; Ginsburg, D.; Baines, J. F.: Selection on cis-regulatory variation at B4galnt2 and its influence on von Willebrand factor in house mice. Molecular Biology and Evolution 26 (3), pp. 567 - 578 (2009)
104.
Journal Article
Parsch, J.; Zhang, Z.; Baines, J. F.: The influence of demography and weak selection on the McDonald-Kreitman test: an empirical study in Drosophila. Molecular Biology and Evolution 26 (3), pp. 691 - 698 (2009)
105.
Journal Article
Carpenter, J.; Hutter, S.; Baines, J. F.; Roller, J.; Saminadin-Peter, S. S.; Parsch, J.; Jiggins, F. M.: The Transcriptional Response of Drosophila melanogaster to Infection with the Sigma Virus (Rhabdoviridae). PLoS One 4 (8) (2009)
106.
Journal Article
Grath, S.; Baines, J. F.; Parsch, J.: Molecular evolution of sex-biased genes in the Drosophila ananassae subgroup. BMC Evolutionary Biology 9 (2009)
107.
Journal Article
Baines, J. F.; Sawyer, S. A.; Hartl, D. L.; Parsch, J.: Effects of X-linkage and sex-biased gene expression on the rate of adaptive protein evolution in Drosophila. Molecular Biology and Evolution 25 (8), pp. 1639 - 1650 (2008)
108.
Journal Article
Schug, M. D.; Baines, J. F.; Killon-Atwood, A.; Mohanty, S.; Das, A.; Grath, S.; Smith, S. G.; Zargham, S.; Mcevey, S. F.; Stephan, W.: Evolution of mating isolation between populations of Drosophila ananassae. Molecular Ecology 17 (11), pp. 2706 - 2721 (2008)
109.
Journal Article
Hense, W.; Baines, J. F.; Parsch, J.: X chromosome inactivation during Drosophila spermatogenesis. PLoS Biology 5 (10), pp. 2288 - 2295 (2007)
110.
Journal Article
Baines, J. F.; Harr, B.: Reduced X-linked diversity in derived populations of house mice. Genetics 175 (4), pp. 1911 - 1921 (2007)
111.
Journal Article
Beye, M.; Gattermeier, I.; Hasselmann, M.; Gempe, T.; Schioett, M.; Baines, J. F.; Schlipalius, D.; Mougel, F.; Emore, C.; Rueppell, O. et al.; Sirvio, A.; Guzman-Novoa, E.; Hunt, G.; Solignac, M.; Page Jr., R. E.: Exceptionally high levels of recombination across the honey bee genome. Genome Research 16 (11), pp. 1339 - 1344 (2006)
112.
Journal Article
Harr, B.; Voolstra, C.; Heinen, T. J. A. J.; Baines, J. F.; Rottscheidt, R.; Ihle, S.; Mueller, W.; Bonhomme, F.; Tautz, D.: A change of expression in the conserved signaling gene MKK7 is associated with a selective sweep in the western house mouse Mus musculus domesticus. Journal of Evolutionary Biology 19 (5), pp. 1486 - 1496 (2006)
113.
Journal Article
Baines, J. F.; Das, A.; Mousset, S.; Stephan, W.: The role of natural selection in genetic differentiation of worldwide populations of Drosophila ananassae. Genetics 168 (4), pp. 1987 - 1998 (2004)
114.
Journal Article
Baines, J. F.; Parsch, J.; Stephan, W.: Pleiotropic effect of disrupting a conserved sequence involved in a long-range compensatory interaction in the drosophila Adh gene. Genetics 166 (1), pp. 237 - 242 (2004)
115.
Journal Article
Baines, J. F.; Chen, Y.; Das, A.; Stephan, W.: DNA sequence variation at a duplicated gene: Excess of replacement polymorphism and extensive haplotype structure in the Drosophila melanogaster bicoid region. Molecular Biology and Evolution 19 (7), pp. 989 - 998 (2002)
116.
Journal Article
Chen, Y.; Carlini, D.; Baines, J. F.; Parsch, J.; Braverman, J.; Tanda, S.; Stephan, W.: RNA secondary structure and compensatory evolution. Genes & Genetic Systems 74 (6), pp. 271 - 286 (1999)

Book Chapter (1)

117.
Book Chapter
Doms, S.; Hermes, B.-M.; Baines, J. F.: Evolutionary perspectives on the human Gut Microbiome. In: The Gut Microbiome in Health and Disease, pp. 65 - 78 (Ed. Haller, D.). Springer, Heidelberg (2018)

Conference Report (5)

118.
Conference Report
Tietje, A. M.; Schilf, P.; Hirose, M.; Künstner, A.; Sadik, C. D.; Baines, J. F.; Ibrahim, S. M.: Complex interactions between mitochondrial genome and microbiota modulate immune response in autoimmune skin inflammation. Meeting of the Arbeitsgemeinschaft Dermatologische Forschung (ADF), Berlin, March 11, 2020 - March 14, 2020. Experimental Dermatology: an International Journal for Rapid Publication of Short Reports in Experimental Dermatology 32 (4), pp. e85 - e86 (2023)
119.
Conference Report
Scheib, N.; Röhrig, N.; Muecklich, S.; Becker, C.; Reinhardt, C.; Baines, J.; Rosenstein, R.; Kamenjarin, N.; Probst, H. C.; Raker, V. et al.; Steinbrink, K.: The gut microbiome is decisive in the outcome of allergic contact dermatitis. 49th Annual Meeting of the Arbeitsgemeinschaft Dermatologische Forschung (ADF), Innsbruck, February 22, 2023 - February 25, 2023. Experimental Dermatology: an International Journal for Rapid Publication of Short Reports in Experimental Dermatology 32 (2), p. E3 - E3 (2023)
120.
Conference Report
Tietje, A.; Schilf, P.; Olbrich, M.; Hirose, M.; Kuenzel, S.; Kunstner, A.; Busch, H. S.; Sadik, C. D.; Baines, J. F.; Ibrahim, S. M.: Complex interactions between gut microbiota and the mitochondria contribute to the pathogenesis of autoimmune skin diseases. 47th Annual Meeting of the Arbeitsgemeinschaft Dermatologische Forschung (ADF), Virtual, March 04, 2021 - March 06, 2021. Experimental Dermatology: an International Journal for Rapid Publication of Short Reports in Experimental Dermatology 30 (3), p. E69 - E69 (2021)
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