
Publications of Paul B. Rainey
All genres
Journal Article (62)
1.
Journal Article
377 (1842), 20200477 (2022)
Transposable elements promote the evolution of genome streamlining. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 2.
Journal Article
11 (1), jkaa024 (2021)
In vivo transcriptome analysis provides insights into host-dependent expression of virulence factors by Yersinia entomophaga MH96, during infection of Galleria mellonella. G3: Genes, Genomes, Genetics 3.
Journal Article
23, pp. 1380 - 1390 (2020)
Meta-population structure and the evolutionary transition to multicellularity. Ecology Letters 4.
Journal Article
9, e53433 (2020)
Eco-evolutionary dynamics of nested Darwinian populations and the emergence of community-level heredity. eLife 5.
Journal Article
10, pp. 5963 - 5975 (2020)
Genotypic and phenotypic analyses reveal distinct population structures and ecotypes for sugar beet‐associatedPseudomonasin Oxford and Auckland. Ecology and Evolution 6.
Journal Article
375, 20190681 (2020)
Experimental manipulation of selfish genetic elements links genes to microbial community function. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 7.
Journal Article
375 (1798), 20190248 (2020)
Toward a dynamical understanding of microbial communities. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 8.
Journal Article
4, pp. 426 - 436 (2020)
Ecological scaffolding and the evolution of individuality. Nature Ecology & Evolution 9.
Journal Article
201 (18), e00110-19 (2019)
Causes and biophysical consequences of cellulose production by Pseudomonas fluorescens SBW25 at the air-liquid interface. Journal of Bacteriology 10.
Journal Article
36 (5), pp. 1071 - 1085 (2019)
Repeated phenotypic evolution by different genetic routes in Pseudomonas fluorescens SBW25. Molecular Biology and Evolution 11.
Journal Article
36 (5), pp. 1056 - 1070 (2019)
Ribosome provisioning activates a bistable switch coupled to fast exit from stationary phase. Molecular Biology and Evolution 12.
Journal Article
8, e38822 (2019)
Predicting mutational routes to new adaptive phenotypes. eLife 13.
Journal Article
13 (8), e0202197 (2018)
Genetic structure of the grey side-gilled sea slug (Pleurobranchaea maculata) in coastal waters of New Zealand. PLoS One 14.
Journal Article
20 (6), pp. 2066 - 2084 (2018)
The ecological genetics of Pseudomonas syringae from kiwifruit leaves. Environmental Microbiology 15.
Journal Article
13 (11), e1005860 (2017)
Fragmentation modes and the evolution of life cycles. PLoS Computational Biology 16.
Journal Article
85 (8), pp. 1580 - 1588 (2017)
Crystal structure of a bicupin protein HutD involved in histidine utilization in Pseudomonas. Proteins: Structure, Function, and Bioinformatics 17.
Journal Article
105 (4), pp. 589 - 605 (2017)
Unravelling the complexity and redundancy of carbon catabolic repression in Pseudomonas fluorescens SBW25. Molecular Microbiology 18.
Journal Article
9 (4), pp. 932 - 944 (2017)
Origin and evolution of the kiwifruit canker pandemic. Genome Biology and Evolution 19.
Journal Article
19 (2), pp. 819 - 832 (2017)
Evolution of copper resistance in the kiwifruit pathogen Pseudomonas syringae pv. actinidiae through acquisition of integrative conjugative elements and plasmids. Environmental Microbiology 20.
Journal Article
9 (8), pp. 2110 - 2121 (2017)
Identification and characterization of domesticated bacterial transposases. Genome Biology and Evolution