Publications of Paul B. Rainey

Journal Article (64)

Journal Article
Willner, D.; Haynes, M. R.; Furlan, M.; Schmieder, R.; Lim, Y. W.; Rainey, P. B.; Rohwer, F.; Conrad, D.: Spatial distribution of microbial communities in the cystic fibrosis lung. ISME JOURNAL 6 (2), pp. 471 - 474 (2012)
Journal Article
Libby, E.; Rainey, P. B.: Exclusion rules, bottlenecks and the evolution of stochastic phenotype switching. Proceedings of the Royal Society of London. Series B: Biological Sciences (London) 278 (1724), pp. 3574 - 3583 (2011)
Journal Article
Bertels, F.; Rainey, P. B.: Within-genome evolution of REPINs: a new familiy of miniature mobile DNA in bacteria. PLoS Genetics 7 (6), e1002132 (2011)
Journal Article
Beaumont, H. J.E.; Gallie, J.; Kost, C.; Ferguson, G. C.; Rainey, P. B.: Experimental evolution of bet hedging. Nature 462, nature08504, pp. 90 - 93 (2009)

Conference Paper (2)

Conference Paper
Rikkerink, E.H.A.; McCann, H.C.; Rees-George, J.; Lu, A.; Gleave, A.P.; Andersen, M.T.; Rainey, P. B.; Templeton, M.D.: Transposition, insertion, deletion and recombination drive variability in the type 3 secretome of pseudomonas syringae pv. Actinidiae, the transition from global effector comparisons to kiwifruit resistance breeding strategies. Acta Horticulturae: I International Symposium on Bacterial Canker of Kiwifruit (1095), pp. 65 - 74 (2015)
Conference Paper
Rainey, P. B.; Beaumont, H. J.; Ferguson, G. C.; Gallie, J.; Kost, C.; Libby, E.; Zhang, X.-X.: The evolutionary emergence of stochastic phenotype switching in bacteria. 10th Symposium on Lactic Acid Bacterium, Egmond aan Zee, August 28, 2011 - September 01, 2011. Microbial Cell Factories 10 (Suppl. 1), S 14, (2011)

Thesis - PhD (2)

Thesis - PhD
Barnett, M.: How bias in the production of phenotypic variation shapes and is shaped by adaptive evolution. Dissertation, 128 pp., Faculty of Mathematics and Natural Sciences at Kiel University, Kiel (2022)
Thesis - PhD
Bhave, D.: A functional analysis of random coding sequences in Escherichia coli. Dissertation, 152 pp., Faculty of Mathematics and Natural Sciences, Kiel University, Kiel (2020)

Working Paper (5)

Working Paper
Wortel, M. T.; Agashe, D.; Bailey, S. F.; Bank, C.; Bisschop, K.; Blankers, T.; Cairns, J.; Colizzi, E. S.; Cusseddu, D.; Desai, M. M. et al.; van Dijk, B.; Egas, M.; Ellers, J.; Groot, A. T.; Heckel, D. G.; Johnson, M. L.; Kraaijeveld, K.; Krug, J.; Laan, L.; Laessig, M.; Lind, P. A.; Meijer, J.; Noble, L. M.; Okasha, S.; Rainey, P. B.; Rozen, D. E.; Shitut, S.; Tans, S. J.; Tenaillon, O.; Teotonio, H.; de Visser, J. A. G. M.; Vroomans, R. M. A.; Werner, G. D. A.; Wertheim, B.; Pennings, P. S.: The why, what and how of predicting evolution across biology: from disease to biotechnology to biodiversity. EcoEvoRxiv Preprints (2022)
Working Paper
Ardré, M.; Doulcier, G.; Brenner, N.; Rainey, P. B.: Interaction among bacterial cells triggers exit from lag phase. (2022)
Working Paper
Nitschke, M. C.; Black, A. J.; Bourrat, P.; Rainey, P. B.: The effect of bottleneck size on evolution in nested Darwinian populations. (2022), 26 pp.
Working Paper
Theodosiou, L.; Farr, A.; Rainey, P. B.: Barcoding populations of Pseudomonas fluorescens SBW25. (2022), 27 pp.
Working Paper
Yulo, P.R.J.; Desprat, N.; Gerth, M.L.; Liu, Y.; Zhang, X.X.; Rainey, P. B.; Hendrickson, H.L.: Experimental evolution of cell shape in bacteria. bioRxiv (2018)
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