Gerth, M. L.; Ferla, M. P.; Rainey, P. B.: The origin and ecological significance of multiple branches for histidine utilization in Pseudomonas aeruginosa PAO1. Environmental Microbiology 14 (8), S. 1929 - 1940 (2012)

Zhang, X.-X.; Chang, H.; Tran, S. L.; Gauntlett, J. C.; Cook, G. M.; Rainey, P. B.: Variation in transport explains polymorphism of histidine and urocanate utilization in a natural Pseudomonas population. Environmental Microbiology 14 (8), S. 1941 - 1951 (2012)

Redondo-Nieto, M.; Barret, M.; Morrisey, J. P.; Germaine, K.; Martínez-Granero, F.; Barahona, E.; Navazo, A.; Sánchez-Contreras, M.; Moynihan, J. A.; Giddens, S. R. et al.; Coppoolse, E. R.; Muriel, C.; Stiekema, W. J.; Rainey, P. B.; Dowling, D.; O'Gara, F.; Martín, M.; Rivilla, R.: Genome sequence of the biocontrol strain Pseudomonas fluorescens F113. Journal of Bacteriology 194 (5), S. 1273 - 1274 (2012)

Willner, D.; Haynes, M. R.; Furlan, M.; Hanson, N.; Kirby, B.; Lim, Y. W.; Rainey, P. B.; Schmieder, R.; Youle, M.; Conrad, D. et al.; Rohwer, a. F.: Case studies of the spatial heterogeneity of DNA viruses in the cystic fibrosis lung. American Journal of Respiratory Cell and Molecular Biology 46 (2), S. 127 - 131 (2012)

Willner, D.; Haynes, M. R.; Furlan, M.; Schmieder, R.; Lim, Y. W.; Rainey, P. B.; Rohwer, F.; Conrad, D.: Spatial distribution of microbial communities in the cystic fibrosis lung. The ISME Journal 6 (2), S. 471 - 474 (2012)

Libby, E.; Rainey, P. B.: Exclusion rules, bottlenecks and the evolution of stochastic phenotype switching. Proceedings of the Royal Society of London. Series B: Biological Sciences (London) 278 (1724), S. 3574 - 3583 (2011)

Bertels, F.; Rainey, P. B.: Within-genome evolution of REPINs: a new familiy of miniature mobile DNA in bacteria. PLoS Genetics 7 (6), e1002132 (2011)

Bertels, F.; Rainey, P. B.: Curiosities of REPINs and RAYTs. Mobile genetic elements 1 (4), S. 262 - 268 (2011)

Gericke, B.; Degner, F.; Hüttmann, T.; Werth, S.; Fortmann-Grote, C.: Performance review of retraining and transfer learning of DeLTA2 for image segmentation for Pseudomonas fluorescens SBW25. In: Proceedings of the 17th International Joint Conference on Biomedical Engineering Systems and Technologies: BIOIMAGING, S. 273 - 280. 17th BIOSTEC Conference, BIOIMAGING24 Track, Rome, Italy, 21. Februar 2024 - 23. Februar 2024. SciTePress, Setúbal, Portugal (2024)

E, J. C.; Hafner, A.; Kluyver, T.; Bertelsen, M.; Kahaly, M. U.; Lecz, Z.; Nourbakhsh, S.; Mancuso, A. P.; Fortmann-Grote, C.: VINYL: The VIrtual Neutron and x-raY Laboratory and its applications. In: Advances in Computational Methods for X-Ray Optics V, Bd. 11493, S. 190 - 200 (Hg. Chubar, O.; Sawhney, K.). SPIE Optical Engineering + Applications 2020, Online only. SPIE (2020)

Rikkerink, E.H.A.; McCann, H.C.; Rees-George, J.; Lu, A.; Gleave, A.P.; Andersen, M.T.; Rainey, P. B.; Templeton, M.D.: Transposition, insertion, deletion and recombination drive variability in the type 3 secretome of pseudomonas syringae pv. Actinidiae, the transition from global effector comparisons to kiwifruit resistance breeding strategies. Acta Horticulturae: I International Symposium on Bacterial Canker of Kiwifruit (1095), S. 65 - 74 (2015)

Rainey, P. B.; Beaumont, H. J.; Ferguson, G. C.; Gallie, J.; Kost, C.; Libby, E.; Zhang, X.-X.: The evolutionary emergence of stochastic phenotype switching in bacteria. 10th Symposium on Lactic Acid Bacterium, Egmond aan Zee, 28. August 2011 - 01. September 2011. Microbial Cell Factories 10 (Suppl. 1), S 14, (2011)

Fortmann-Grote, C.: Linked (Open) Data for Microbial Population Biology. NFDI4BIOIMAGE Konsortium (2024)

Fortmann-Grote, C.: Künstliche Intelligenz und Evolution. MPI Winter Talks, Plön (2024)

Fortmann-Grote, C.: AI in research. PostDoc Retreat Discussion Session 2023 (2023)

Fortmann-Grote, C.: The NFDI4BIOIMAGE consortium. NFDI@MPG Workshop 2023 (2023)

Fortmann-Grote, C.; Bertels, F.; Irmer, J.: RAREFAN: a publicly accessible bioinformatic pipeline on a cloud server - Implementation and limitations. Workshop on "Life Science/Bioinformatics and HPC 2023, at GWDG (2023)

Karita, Y.; Rodríguez-Sánchez, G. T.; Brambilla, E.; Hernandez-Beltran, J. C. R.; Schwarz, M.; Rainey, P. B.: Inoculum-dependent instability of a biofilm pellicle is rescued by non-biofilm formers. APS march meeting 2024, Minneapolis & Virtual, 04. März 2024 - 08. März 2024. Bulletin of the American Physical Society, (2024)

Fortmann-Grote, C.; Rainey, P. B.: From genome annotation to knowledge graph: the case of Pseudomonas fluorescens SBW25. Intelligent Systems for Molecular Biology, 13. Juli 2022., (2022)

Fortmann-Grote, C.; Rainey, P.: Data to knowledge - The Pseudomonas fluorescens SBW25 knowledge base. Conference "Intelligent Systems for Molecular Biology". Virtual Event (2021)