Publications of the Institute

Journal Article

Rausch, P.; Rühlemann, M.; Hermes, B.; Doms, S.; Dagan, T.; Dierking, K.; Domin, H.; Fraune, S.; Frieling, J. v.; Humeida, U. H. et al.; Heinsen, F.-A.; Höppner, M.; Jahn, M.; Jaspers, C.; Kissoyan, K. A. B.; Langfeldt, D.; Rehman, A.; Reusch, T. B. H.; Röder, T.; Schmitz, R. A.; Schulenburg, H.; Soluch, R.; Sommer, F.; Stukenbrock, E. H.; Weiland-Bräuer, N.; Rosenstiel, P.; Franke, A.; Bosch, T.; Baines, J. F.: Comparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms. Microbiome 7 (1), 133 (2019)

MPG.PuRe

Journal Article

Snoek, B. L.; Volkers, R. J. M.; Nijveen, H.; Petersen, C.; Dirksen, P.; Sterken, M. G.; Nakad, R.; Riksen, J. A. G.; Rosenstiel, P.; Stastna, J. J. et al.; Braeckman, B. P.; Harvey, S. C.; Schulenburg, H.; Kammenga, J. E.: A multi-parent recombinant inbred line population of C. elegans allows identification of novel QTLs for complex life history traits. BMC Biology 17, 24 (2019)

MPG.PuRe

Journal Article

Paccard, A.; Hanson, D.; Stuart, Y. E.; von Hippel, F. A.; Kalbe, M.; Klepaker, T.; Skúlason, S.; Kristjánsson, B. K.; Bolnick, D. I.; Hendry, A. P. et al.; Barrett, R. D. H.: Repeatability of adaptive radiation depends on spatial scale: regional versus global replicates of stickleback in lake versus stream habitats. Journal of Heredity 111 (1), pp. 43 - 56 (2019)

MPG.PuRe

Journal Article

Bekpen, C.; Tautz, D.: Human core duplicon gene families: game changers or game players? Briefings in Functional Genomics 18 (6), pp. 402 - 411 (2019)

MPG.PuRe

Journal Article

Bertels, F.; Leemann, C.; Metzner, K. J.; Regoes, R.: Parallel evolution of HIV-1 in a long-term experiment. Molecular Biology and Evolution 36 (11), pp. 2400 - 2414 (2019)

MPG.PuRe

Journal Article

Boynton, P. J.; Kowallik, V.; Landermann, D.; Stukenbrock, E. H.: Quantifying the efficiency and biases of forest Saccharomyces sampling strategies. Yeast 36 (11), pp. 657 - 668 (2019)

MPG.PuRe

Journal Article

Chowell, D.; Krishna, C.; Pierini, F.; Makarov, V.; Rizvi, N. A.; Kuo, F.; Morris, L. G. T.; Riaz, N.; Lenz, T. L.; Chan, T. A.: Evolutionary divergence of HLA class I genotype impacts efficacy of cancer immunotherapy. Nature Medicine 25 (11), pp. 1715 - 1720 (2019)

MPG.PuRe

Journal Article

Czuppon, P.; Rogers, D. W.: Evolution of mating types in finite populations: the precarious advantage of being rare. Journal of Evolutionary Biology 32 (11), pp. 1290 - 1299 (2019)

MPG.PuRe

Journal Article

Foley, S.; Lüddecke, T.; Cheng, D.-Q.; Krehenwinkel, H.; Künzel, S.; Longhorn, S.J.; Wendt, I.; von Wirth, V.; Tänzler, R.; Vences, M. et al.; Piel, W.H.: Tarantula phylogenomics: A robust phylogeny of deep theraphosid clades inferred from transcriptome data sheds light on the prickly issue of urticating setae evolution. Molecular Phylogenetics and Evolution 140, 106573 (2019)

MPG.PuRe

Journal Article

Harr, B.; Price, T.: Three thousand years in Tibet. National Science Review 7 (1), pp. 129 - 130 (2019)

MPG.PuRe

Journal Article

Krebs, R.; Linnenbrink, M.; Guenther, A.: Validating standardised personality tests under semi-natural conditions in wild house mice (Mus musculus domesticus). Ethology 125 (11), pp. 761 - 763 (2019)

MPG.PuRe

Journal Article

Lindholm, A.; Sutter, A.; Künzel, S.; Tautz, D.; Rehrauer, H.: Effects of a male meiotic driver on male and female transcriptomes in the house mouse. Proceedings of the Royal Society B: Biological Sciences 286 (1915), 20191927 (2019)

MPG.PuRe

Journal Article

Ferro, K.; Peuß, R.; Yang, W.; Rosenstiel, P.; Schulenburg, H.; Kurtz, J.: Experimental evolution of immunological specificity. Proceedings of the National Academy of Sciences of the United States of America 116 (41), pp. 20598 - 20604 (2019)

MPG.PuRe

Journal Article

Barbosa, C.; Römhild, R.; Rosenstiel, P.; Schulenburg, H.: Evolutionary stability of collateral sensitivity to antibiotics in the model pathogen̑extit Pseudomonas aeruginosa. eLife 8, e51481 (2019)

MPG.PuRe

Journal Article

Carpenter, E. J.; Matasci, N.; Ayyampalayam, S.; Wu, S.; Sun, J.; Yu, J.; Jimenez Vieira, F. R.; Bowler, C.; Dorrell, R. G.; Gitzendanner, M. A. et al.; Li, L.; Du, W.; Ullrich, K. K.; Wickett, N. J.; Barkmann, T. J.; Barker, M. S.; Leebens-Mack, J. H.; Wong, G. K.-S.: Access to RNA-sequencing data from 1,173 plant species: The 1000 Plant transcriptomes initiative (1KP). GigaScience 8 (10), giz126 (2019)

MPG.PuRe

Journal Article

Feurtey, A.; Stevens, D. M.; Stephan, W.; Stukenbrock, E. H.: Interspecific gene exchange introduces high genetic variability in crop pathogen. Genome Biology and Evolution 11 (11), pp. 3095 - 3105 (2019)

MPG.PuRe

Journal Article

Leebens-Mack, J. H.; Barker, M. S.; Carpenter, E. J.; Deyholos, M. K.; Gitzendanner, M. A.; Graham, S. W.; Grosse, I.; Li, Z.; Melkonian, M.; Mirarab, S. et al.; Porsch, M.; Quint, M.; Rensing, S. A.; Soltis, D. E.; Soltis, P. S.; Stevenson, D. W.; Ullrich, K. K.; Wickett, N. J.; DeGironimo, L.; Edger, P. P.; Jordon-Thaden, I. E.; Joya, S.; Liu, T.; Melkonian, B.; Miles, N. W.; Pokorny, L.; Quigley, C.; Thomas, P.; Villarreal, J. C.; Augustin, M. M.; Barrett, M. D.; Baucom, R. S.; Beerling, D. J.; Benstein, R. M.; Biffin, E.; Brockington, S. F.; Burge, D. O.; Burris, J. N.; Burris, K. P.; Burtet-Sarramegna, V.; Caicedo, A. L.; Cannon, S. B.; Çebi, Z.; Chang, Y.; Chater, C.; Cheeseman, J. M.; Chen, T.; Clarke, N. D.; Clayton, H.; Covshoff, S.; Crandall-Stotler, B. J.; Cross, H.; dePamphilis, C. W.; Der, J. P.; Determann, R.; Dickson, R. C.; Di Stilio, V. S.; Ellis, S.; Fast, E.; Feja, N.; Field, K. J.; Filatov, D. A.; Finnegan, P. M.; Floyd, S. K.; Fogliani, B.; García, N.; Gâteblé, G.; Godden, G. T.; Goh, F.; Greiner, S.; Harkess, A.; Heaney, J. M.; Helliwell, K. E.; Heyduk, K.; Hibberd, J. M.; Hodel, R. G. J.; Hollingsworth, P. M.; Johnson, M. T. J.; Jost, R.; Joyce, B.; Kapralov, M. V.; Kazamia, E.; Kellogg, E. A.; Koch, M. A.; Von Konrat, M.; Könyves, K.; Kutchan, T. M.; Lam, V.; Larsson, A.; Leitch, A. R.; Lentz, R.; Li, F.-W.; Lowe, A. J.; Ludwig, M.; Manos, P. S.; Mavrodiev, E.; McCormick, M. K.; McKain, M.; McLellan, T.; McNeal, J. R.; Miller, R. E.; Nelson, M. N.; Peng, Y.; Ralph, P.; Real, D.; Riggins, C. W.; Ruhsam, M.; Sage, R. F.; Sakai, A. K.; Scascitella, M.; Schilling, E. E.; Schlösser, E.-M.; Sederoff, H.; Servick, S.; Sessa, E. B.; Shaw, A. J.; Shaw, S. W.; Sigel, E. M.; Skema, C.; Smith, A. G.; Smithson, A.; Stewart, C. N.; Stinchcombe, J. R.; Szövényi, P.; Tate, J. A.; Tiebel, H.; Trapnell, D.; Villegente, M.; Wang, C.-N.; Weller, S. G.; Wenzel, M.; Weststrand, S.; Westwood, J. H.; Whigham, D. F.; Wu, S.; Wulff, A. S.; Yang, Y.; Zhu, D.; Zhuang, C.; Zuidof, J.; Chase, M. W.; Pires, J. C.; Rothfels, C. J.; Yu, J.; Chen, C.; Chen, L.; Cheng, S.; Li, J.; Li, R.; Li, X.; Lu, H.; Ou, Y.; Sun, X.; Tan, X.; Tang, J.; Tian, Z.; Wang, F.; Wang, J.; Wei, X.; Xu, X.; Yan, Z.; Yang, F.; Zhong, X.; Zhou, F.; Zhu, Y.; Zhang, Y.; Ayyampalayam, S.; Barkman, T. J.; Nguyen, N.-p.; Matasci, N.; Nelson, D. R.; Sayyari, E.; Wafula, E. K.; Walls, R. L.; Warnow, T.; An, H.; Arrigo, N.; Baniaga, A. E.; Galuska, S.; Jorgensen, S. A.; Kidder, T. I.; Kong, H.; Lu-Irving, P.; Marx, H. E.; Qi, X.; Reardon, C. R.; Sutherland, B. L.; Tiley, G. P.; Welles, S. R.; Yu, R.; Zhan, S.; Gramzow, L.; Theißen, G.; Wong, G. K.-S.; One Thousand Plant Transcriptomes Initiative: One thousand plant transcriptomes and the phylogenomics of green plants. Nature 574 (7780), pp. 679 - 685 (2019)

MPG.PuRe

Journal Article

Lustyk, D.; Kinský, S.; Ullrich, K. K.; Yancoskie, M.; Kasíková, L.; Gergelits, V.; Sedlácek, R.; Chan, Y. F.; Odenthal-Hesse, L.; Forejt, J. et al.; Jansa, P.: Genomic structure of Hstx2 modifier of Prdm9-dependent hybrid male sterility in mice. Genetics 213 (3), pp. 1047 - 1063 (2019)

MPG.PuRe

Journal Article

Wu, B.; Park, H. J.; Wu, L.; Zhou, D.: Evolution of cooperation driven by self-recommendation. Physical Review E 100, 042303 (2019)

MPG.PuRe

Journal Article

Benesh, D. P.: Tapeworm manipulation of copepod behaviour: parasite genotype has a larger effect than host genotype. Biology Letters 15, 20190495 (2019)

MPG.PuRe

Journal Article

Hugoson, E.; Lam, W. T.; Guy, L.: miComplete: weighted quality evaluation of assembled microbial genomes. Bioinformatics, btz664 (2019)

MPG.PuRe

Journal Article

Kahilainen, K. K.; Thomas, S. M.; Harrod, C.; Hayden, B.; Eloranta, A. P.: Trophic ecology of piscivorous Arctic charr (Salvelinus alpinus (L.)) in subarctic lakes with contrasting food-web structures. Hydrobiologia 840 (1), pp. 227 - 243 (2019)

MPG.PuRe

Journal Article

Krehenwinkel, H.; Meese, S.; Mayer, C.; Ruch, J.; Schneider, J.; Bilde, T.; Künzel, S.; Henderson, J. B.; Russack, J.; Simison, W. B. et al.; Gillespie, R.; Uhl, G.: Cost effective microsatellite isolation and genotyping by high throughput sequencing. The Journal of Arachnology 47 (2), pp. 190 - 201 (2019)

MPG.PuRe

Journal Article

Moutinho, A. F.; Trancoso, F. F.; Dutheil, J. Y.: The impact of protein architecture on adaptive evolution. Molecular Biology and Evolution 36 (9), pp. 2013 - 2028 (2019)

MPG.PuRe

Journal Article

Ardré, M.; Dufour, D.; Rainey, P. B.: Causes and biophysical consequences of cellulose production by Pseudomonas fluorescens SBW25 at the air-liquid interface. Journal of Bacteriology 201 (18), e00110-19 (2019)

MPG.PuRe

Journal Article

Boynton, P. J.: The ecology of killer yeasts: interference competition in natural habitats. Yeast 36 (8), pp. 473 - 485 (2019)

MPG.PuRe

Journal Article

Giaimo, S.; Traulsen, A.: Generation time measures the trade-off between survival and reproduction in a life cycle. The American Naturalist 194 (2), pp. 285 - 290 (2019)

MPG.PuRe

Journal Article

Hassani, M. A.; Özkurt, E.; Seybold, H.; Dagan, T.; Stukenbrock, E. H.: Interactions and coadaptation in plant metaorganisms. Annual Review of Phytopathology 57, pp. 22.1 - 22.21 (2019)

MPG.PuRe

Journal Article

Huang, Y.; Feulner, P. G. D.; Eizaguirre, C.; Lenz, T. L.; Bornberg-Bauer, E.; Milinski, M.; Reusch, T. B. H.; Chain, F. J. J.: Genome-wide genotype-expression relationships reveal both copy number and single nucleotide differentiation contribute to differential gene expression between stickleback ecotypes. Genome Biology and Evolution 11 (8), pp. 2344 - 2359 (2019)

MPG.PuRe

Journal Article

Xie, C.; Bekpen, C.; Künzel, S.; Keshavarz, M.; Krebs-Wheaton, R.; Skrabar, N.; Ullrich, K. K.; Tautz, D.: A de novo evolved gene in the house mouse regulates female pregnancy cycles. eLife 8, e44392 (2019)

MPG.PuRe

Journal Article

Alzate, A.; Janzen, T.; Bonte, D.; Rosindell, J.; Etienne, R. S.: A simple spatially explicit neutral model explains the range size distribution of reef fishes. Global Ecology and Biogeography 28 (7), pp. 875 - 890 (2019)

MPG.PuRe

Journal Article

García, J.; Traulsen, A.: Evolution of coordinated punishment to enforce cooperation from an unbiased strategy space. Interface: Journal of the Royal Society 16 (156), 20190127 (2019)

MPG.PuRe

Journal Article

Koussoroplis, A.-M.; Schälicke, S.; Raatz, M.; Bach, M.; Wacker, A.: Feeding in the frequency domain: coarser-grained environments increase consumer sensitivity to resource variability, covariance and phase. Ecology Letters 22 (7), pp. 1104 - 1114 (2019)

MPG.PuRe

Journal Article

Prabh, N.; Rödelsperger, C.: De Novo, divergence, and mixed origin contribute to the emergence of orphan genes in Pristionchus nematodes. G3: Genes, Genomes, Genetics 9 (7), pp. 2277 - 2286 (2019)

MPG.PuRe

Journal Article

Sokolovskis, K.; Lundberg, M.; Liedvogel, M.; Solovyeva, D.; Åkesson, S.; Willemoes, M.; Bensch, S.: Phenotypic and genetic characterization of the East Siberian Willow Warbler (Phylloscopus trochilus yakutensis Ticehurst, 1935) in relation to the European subspecies. Journal of Ornithology 160 (3), pp. 721 - 731 (2019)

MPG.PuRe

Journal Article

Suwandi, A.; Galeev, A.; Riedel, R.; Sharma, S.; Seeger, K.; Sterzenbach, T.; García Pastor, L.; Boyle, E. C.; Gal-Mor, O.; Hensel, M. et al.; Casadesús, J.; Baines, J. F.; Grassl, G. A.: Std fimbriae-fucose interaction increases Salmonella-induced intestinal inflammation and prolongs colonization. PLoS Pathogens 15 (7), e1007915 (2019)

MPG.PuRe

Journal Article

Zhou, D.; Luo, Y.; Dingli, D.; Traulsen, A.: The invasion of de-differentiating cancer cells into hierarchical tissues. PLoS Computational Biology 15 (7), e1007167 (2019)

MPG.PuRe

Journal Article

Degenhardt, F.; Wendorff, M.; Wittig, M.; Ellinghaus, E.; Datta, L. W.; Schembri, J.; Ng, S. C.; Rosati, E.; Hübenthal, M.; Ellinghaus, D. et al.; Jung, E. S.; Lieb, W.; Abedian, S.; Malekzadeh, R.; Cheon, J. H.; Ellul, P.; Sood, A.; Midha, V.; Bk, T.; Wong, S. H.; Schreiber, S.; Yamazaki, K.; Kubo, M.; Boucher, G.; Rioux, J.; Lenz, T. L.; Brant, S. R.; Franke, A.: Construction and benchmarking of a multi-ethnic reference panel for the imputation of HLA class I and II alleles. Human Molecular Genetics 28 (12), pp. 2078 - 2092 (2019)

MPG.PuRe

Journal Article

Grandaubert, J.; Dutheil, J. Y.; Stukenbrock, E. H.: The genomic determinants of adaptive evolution in a fungal pathogen. Evolution Letters 3 (3), pp. 299 - 312 (2019)

MPG.PuRe

Journal Article

Mosca, E.; Cruz, F.; Gómez-Garrido, J.; Bianco, L.; Rellstab, C.; Brodbeck, S.; Csilléry, K.; Fady, B.; Fladung, M.; Fussi, B. et al.; Gömöry, D.; González-Martínez, S. C.; Grivet, D.; Gut, M.; Hansen, O. K.; Heer, K.; Kaya, Z.; Krutovsky, K. V.; Kersten, B.; Liepelt, S.; Opgenoorth, L.; Sperisen, C.; Ullrich, K. K.; Vendramin, G. G.; Westergren, M.; Ziegenhagen, B.; Alioto, T.; Gugerli, F.; Heinze, B.; Höhn, M.; Troggio, M.; Neale, D. B.: A reference genome sequence for the european Silver Fir (Abies alba Mill.): a ommunity-generated genomic resource. G3: Genes, Genomes, Genetics 9 (7), pp. 2039 - 2049 (2019)

MPG.PuRe

Journal Article

Pirogov, A.; Pfaffelhuber, P.; Börsch-Haubold, A.; Haubold, B.: High-complexity regions in mammalian genomes are enriched for developmental genes. Bioinformatics 35 (11), pp. 1813 - 1819 (2019)

MPG.PuRe

Journal Article

Scheid, O. M.; Mérai, Z.; Graeber, K.; Arshad, W.; Leubner-Metzger, G.; Grosche, C.; Ullrich, K. K.; Wilhelmsson, P.; Rensing, S. A.; Tarkowská, D. et al.; Strnad, M.; Turečková, V.: Aethionema arabicum: a novel model plant to study the light control of seed germination. Journal of Experimental Botany 70 (12), pp. 3313 - 3328 (2019)

MPG.PuRe

post-print

Journal Article

Trillmich, F.; Geißler, E.; Guenther, A.: Senescence and costs of reproduction in the life history of a small precocial species. Ecology and Evolution 9 (12), pp. 7069 - 7079 (2019)

MPG.PuRe

Journal Article

Pichugin, Y.; Park, H. J.; Traulsen, A.: Evolution of simple multicellular life cycles in dynamic environments. Interface: Journal of the Royal Society 16 (154), 20190054 (2019)

MPG.PuRe

Journal Article

Hindersin, L.; Wu, B.; Traulsen, A.; Garcia, J.: Computation and simulation of evolutionary game dynamics in finite populations. Scientific Reports 9, 6946 (2019)

MPG.PuRe

Journal Article

Gallie, J.; Bertels, F.; Remigi, P.; Ferguson, G. C.; Nestmann, S.; Rainey, P. B.: Repeated phenotypic evolution by different genetic routes in Pseudomonas fluorescens SBW25. Molecular Biology and Evolution 36 (5), pp. 1071 - 1085 (2019)

MPG.PuRe

Journal Article

Gao, Y.; Traulsen, A.; Pichugin, Y.: Interacting cells driving the evolution of multicellular life cycles. PLoS Computational Biology 15 (5), e1006987 (2019)

MPG.PuRe

Journal Article

Koch, H. R.; Blohm-Sievers, E.; Liedvogel, M.: Rapid sex determination of a wild passerine species using loop-mediated isothermal amplification (LAMP). Ecology and Evolution 9 (10), pp. 5849 - 5858 (2019)

MPG.PuRe

Journal Article

Piecyk, A.; Ritter, M.; Kalbe, M.: The right response at the right time: exploring helminth immune modulation in sticklebacks by experimental co-infection. Molecular Ecology 28 (10), pp. 2668 - 2680 (2019)

MPG.PuRe

Journal Article

Remigi, P.; Ferguson, G. C.; McConnell, E.; De Monte, S.; Rogers, D. W.; Rainey, P. B.: Ribosome provisioning activates a bistable switch coupled to fast exit from stationary phase. Molecular Biology and Evolution 36 (5), pp. 1056 - 1070 (2019)

MPG.PuRe

Journal Article

Scheuerl, T.; Cairns, J.; Becks, L.; Hiltunen, T.: Predator coevolution and prey trait variability determine species coexistence. Proceedings of the Royal Society B: Biological Sciences 286 (1902), 20190245 (2019)

MPG.PuRe

Journal Article

Möller, M.; Schotanus, K.; Soyer, J.; Haueisen, J.; Happ, K.; Stralucke, M.; Happel, P.; Smith, K. M.; Connolly, L. R.; Freitag, M. et al.; Stukenbrock, E. H.: Destabilization of chromosome structure by histone H3 lysine 27 methylation. PLoS Genetics 15 (4), e1008093 (2019)

MPG.PuRe

Journal Article

Meyer, B. S.; Hablützel, P. I.; Roose, A. K.; Hofmann, M. J.; Salzburger, W.; Raeymaekers, J. A. M.: An exploration of the links between parasites, trophic ecology, morphology, and immunogenetics in the Lake Tanganyika cichlid radiation. Hydrobiologia 832 (1), pp. 215 - 233 (2019)

MPG.PuRe

Journal Article

Opasic, L.; Zhou, D.; Werner, B.; Dingli, D.; Traulsen, A.: How many samples are needed to infer truly clonal mutations from heterogenous tumours? BMC Cancer 19, 403 (2019)

MPG.PuRe

Journal Article

Park, H. J.; Gokhale, C. S.: Ecological feedback on diffusion dynamics. Royal Society Open Science 6 (2), 181273 (2019)

MPG.PuRe

Journal Article

Zhang, W.; Gao, Y.; Long, M.; Shen, B.: Origination and evolution of orphan genes and de novo genes in the genome of Caenorhabditis elegans. Science China Life Sciences 62 (4), pp. 579 - 593 (2019)

MPG.PuRe

Journal Article

Boynton, P. J.; Peterson, C. N.; Pringle, A.: Superior dispersal ability can lead to persistent ecological dominance throughout succession. Applied and Environmental Microbiology 85 (6), e02421-18 (2019)

MPG.PuRe

post-print

Journal Article

Benesh, D. P.: Crowding in the first intermediate host does not affect infection probability in the second host in two helminths. Journal of Helminthology 93 (2), pp. 172 - 176 (2019)

MPG.PuRe

Journal Article

Schmid, D. W.; McGee, M. D.; Best, R. J.; Seehausen, O.; Matthews, B.: Rapid divergence of predator functional traits affects prey composition in aquatic communities. The American Naturalist 193 (3), pp. 331 - 345 (2019)

MPG.PuRe

Journal Article

Römhild, R.; Schulenburg, H.: Evolutionary ecology meets the antibiotic crisis: can we control pathogen adaptation through sequential therapy? Evolution, Medicine and Public Health 2019 (1), pp. 37 - 45 (2019)

MPG.PuRe

Journal Article

Lagkouvardos, I.; Lesker, T. R.; Hitch, T. C. A.; Gálvez, E. J. C.; Smit, N.; Neuhaus, K.; Wang, J.; Baines, J. F.; Abt, B.; Stecher, B. et al.; Overmann, J.; Strowig, T.; Clavel, T.: Sequence and cultivation study of Muribaculaceae reveals novel species, host preference, and functional potential of this yet undescribed family. Microbiome 7, 28 (2019)

MPG.PuRe

Journal Article

Lipinski, S.; Petersen, B.-S.; Barann, M.; Piecyk, A.; Tran, F.; Mayr, G.; Jentzsch, M.; Aden, K.; Stengel, S. T.; Klostermeier, U. C. et al.; Sheth, V.; Ellinghaus, D.; Rausch, T.; Korbel, J. O.; Nothnagel, M.; Krawczak, M.; Gilissen, C.; Veltman, J. A.; Forster, M.; Forster, P.; Lee, C. C.; Fritscher-Ravens, A.; Schreiber, S.; Franke, A.; Rosenstiel, P.: Missense variants in NOX1 and p22phox in a case of very-early-onset inflammatory bowel disease are functionally linked to NOD2. Cold Spring Harbor Molecular Case Studies 5 (1), a002428 (2019)

MPG.PuRe

Journal Article

Tautz, D.: Nova Acta Leopoldina: lebende Dokumente als neues Publikationsmodell. Biospektrum 25 (1), p. 107 - 107 (2019)

MPG.PuRe

Journal Article

Arora, J.; McLaren, P. J.; Chaturvedi, N.; Carrington, M.; Fellay, J.; Lenz, T. L.: HIV peptidome-wide association study reveals patient-specific epitope repertoires associated with HIV control. Proceedings of the National Academy of Sciences of the United States of America 116 (3), pp. 944 - 949 (2019)

MPG.PuRe

post-print

Journal Article

Papkou, A.; Guzella, T.; Yang, W.; Koepper, S.; Pees, B.; Schalkowski, R.; Barg, M.-C.; Rosenstiel, P. C.; Teotónio, H.; Schulenburg, H.: The genomic basis of Red Queen dynamics during rapid reciprocal host–pathogen coevolution. Proceedings of the National Academy of Sciences of the United States of America 116 (3), pp. 923 - 928 (2019)

MPG.PuRe

Journal Article

Barroso, G. V.; Puzovic, N.; Dutheil, J. Y.: Inference of recombination maps from a single pair of genomes and its application to archaic samples. PLoS Genetics 15 (11), e1008449 (2019)

MPG.PuRe

Journal Article

Becks, L.; Milinski, M.: Extortion strategies resist disciplining when higher competitiveness is rewarded with extra gain. Nature Communications 10, 783 (2019)

MPG.PuRe

Journal Article

Beemelmanns, A.; Poirier, M.; Bayer, T.; Künzel, S.; Roth, O.: Microbial embryonal colonization during pipefish male pregnancy. Scientific Reports 9, 3 (2019)

MPG.PuRe

Journal Article

Botelho, J.; Grosso, F.; Peixe, L.: Antibiotic resistance in Pseudomonas aeruginosa – Mechanisms, epidemiology and evolution. Drug Resistance Updates 44, pp. 26 - 47 (2019)

MPG.PuRe

Journal Article

Botelho, J.; Lood, C.; Partridge, S. R.; van Noort, V.; Lavigne, R.; Grosso, F.; Peixe, L.: Combining sequencing approaches to fully resolve a carbapenemase-encoding megaplasmid in a Pseudomonas shirazica clinical strain. Emerging Microbes & Infections 8 (1), pp. 1186 - 1194 (2019)

MPG.PuRe

Journal Article

Caetano-Anollés, D.; Nasir, A.; Kim, K. M.; Caetano-Anollés, G.: Testing empirical support for evolutionary models that root the tree of life. Journal of Molecular Evolution 87 (2), pp. 131 - 142 (2019)

MPG.PuRe

Journal Article

Demarre, G.; Prudent, V.; Schenk, H.; Rousseau, E.; Bringer, M.-A.; Barnich, N.; Tran Van Nhieu, G.; Rimsky, S.; De Monte, S.; Espéli, O.: The Crohn’s disease-associated Escherichia coli strain LF82 relies on SOS and stringent responses to survive, multiply and tolerate antibiotics within macrophages. PLoS Pathogens 15 (11), e1008123 (2019)

MPG.PuRe

Journal Article

Denton, J. A.; Gokhale, C. S.: Synthetic mutualism and the intervention dilemma. Life 9 (1), life9010015 (2019)

MPG.PuRe

Journal Article

Esser, D.; Lange, J.; Marinos, G.; Sieber, M.; Best, L.; Prasse, D.; Bathia, J.; Rühlemann, M. C.; Boersch, K.; Jaspers, C. et al.; Sommer, F.: Functions of the microbiota for the physiology of animal metaorganisms. Journal of Innate Immunity 11 (5), pp. 393 - 404 (2019)

MPG.PuRe

Journal Article

Fischer, M. A.; Ulbricht, A.; Neulinger, S. C.; Refai, S.; Waßmann, K.; Künzel, S.; Schmitz, R. A.: Immediate effects of ammonia shock on transcription and composition of a biogas reactor microbiome. Frontiers in Microbiology 10, 2064 (2019)

MPG.PuRe

Journal Article

Garcia-Porta, J.; Irisarri, I.; Kirchner, M.; Rodríguez, A.; Kirchhof, S.; Brown, J. L.; MacLeod, A.; Turner, A. P.; Ahmadzadeh, F.; Albaladejo, G. et al.; Crnobrnja-Isailovic, J.; De la Riva, I.; Fawzi, A.; Galán, P.; Göçmen, B.; Harris, D. J.; Jiménez-Robles, O.; Joger, U.; Jovanović Glavaš, O.; Karış, M.; Koziel, G.; Künzel, S.; Lyra, M.; Miles, D.; Nogales, M.; Oğuz, M. A.; Pafilis, P.; Rancilhac, L.; Rodríguez, N.; Rodríguez Concepción, B.; Sanchez, E.; Salvi, D.; Slimani, T.; S’khifa, A.; Qashqaei, A. T.; Žagar, A.; Lemmon, A.; Moriarty Lemmon, E.; Carretero, M. A.; Carranza, S.; Philippe, H.; Sinervo, B.; Müller, J.; Vences, M.; Wollenberg Valero, K. C.: Environmental temperatures shape thermal physiology as well as diversification and genome-wide substitution rates in lizards. Nature Communications 10, 4077 (2019)

MPG.PuRe

Journal Article

Geirsdottir, L.; David, E.; Keren-Shaul, H.; Weiner, A.; Bohlen, S. C.; Neuber, J.; Balic, A.; Giladi, A.; Sheban, F.; Dutertre, C.-A. et al.; Pfeifle, C.; Peri, F.; Raffo-Romero, A.; Vizioli, J.; Matiasek, K.; Scheiwe, C.; Meckel, S.; Mätz-Rensing, K.; van der Meer, F.; Thormodsson, F. R.; Stadelmann, C.; Zilkha, N.; Kimchi, T.; Ginhoux, F.; Ulitsky, I.; Erny, D.; Amit, I.; Prinz, M.: Cross-species single-cell analysis reveals divergence of the primate microglia program. Cell 179 (7), pp. 1609 - 1622.e16 (2019)

MPG.PuRe

Journal Article

Hafer-Hahmann, N.: Experimental evolution of parasitic host manipulation. Proceedings of the Royal Society B: Biological Sciences 286 (1895), 20182413 (2019)

MPG.PuRe

Journal Article

Hafer-Hahmann, N.: Behavior out of control: experimental evolution of resistance to host manipulation. Ecology and Evolution 9 (12), pp. 7237 - 7245 (2019)

MPG.PuRe

Journal Article

Hasan Ali, O.; Berner, F.; Bomze, D.; Fässler, M.; Diem, S.; Cozzio, A.; Jörger, M.; Früh, M.; Driessen, C.; Lenz, T. L. et al.; Flatz, L.: Human leukocyte antigen variation is associated with adverse events of checkpoint inhibitors. European Journal of Cancer 107, pp. 8 - 14 (2019)

MPG.PuRe

Journal Article

Haueisen, J.; Möller, M.; Eschenbrenner, C. J.; Grandaubert, J.; Seybold, H.; Adamiak, H.; Stukenbrock, E. H.: Highly flexible infection programs in a specialized wheat pathogen. Ecology and Evolution 9 (1), pp. 275 - 294 (2019)

MPG.PuRe

Journal Article

Herp, S.; Brugiroux, S.; Garzetti, D.; Ring, D.; Jochum, L.M.; Beutler, M.; Eberl, C.; Hussain, S.; Walter, S.; Gerlach, R.G. et al.; Ruscheweyh, H.J.; Huson, D.; Sellin, M.E.; Slack, E.; Hanson, B.; Loy, A.; Baines, J. F.; Rausch, P.; Basic, M.; Bleich, A.; Berry, D.; Stecher, B.: Mucispirillum schaedleri antagonizes salmonella virulence to protect mice against Colitis. Cell Host & Microbe 25 (5), pp. 681 - 694.e8 (2019)

MPG.PuRe

Journal Article

Imhoff, J. F.; Rahn, T.; Künzel, S.; Neulinger, S. C.: Phylogeny of anoxygenic photosynthesis based on sequences of photosynthetic reaction center proteins and a key enzyme in bacteriochlorophyll biosynthesis, the chlorophyllide reductase. Microorganisms 7 (11), 576 (2019)

MPG.PuRe

Journal Article

Jaspers, C.; Weiland-Bräuer, N.; Fischer, M. A.; Künzel, S.; Schmitz, R. A.; Reusch, T. B. H.: Microbiota differences of the comb jelly Mnemiopsis leidyi in native and invasive sub-populations. Frontiers in marine science 6, 635 (2019)

MPG.PuRe

Journal Article

Kowalski, G. J.; Grimm, V.; Herde, A.; Guenther, A.; Eccard, J. A.: Does animal personality affect movement in habitat corridors? Experiments with common voles (Microtus arvalis) using different corridor widths. Animals 9, 219 (2019)

MPG.PuRe

Journal Article

Langan, E.A.; Künstner, A.; Miodovnik, M.; Zillikens, D.; Thaçi, D.; Baines, J. F.; Ibrahim, S.M.; Solbach, W.; Knobloch, J.K.: Combined culture and metagenomic analyses reveal significant shifts in the composition of the cutaneous microbiome in psoriasis. British Journal of Dermatology 181 (1), pp. 1254 - 1264 (2019)

MPG.PuRe

Journal Article

Lind, P. A.; Libby, E.; Herzog, J.; Rainey, P. B.: Predicting mutational routes to new adaptive phenotypes. eLife 8, e38822 (2019)

MPG.PuRe

Journal Article

Mack, K. L.; Phifer-Rixey, M.; Harr, B.; Nachman, M. W.: Gene expression networks across multiple tissues are associated with rates of molecular evolution in wild house mice. Genes 10 (3), 225 (2019)

MPG.PuRe

Journal Article

Manczinger, M.; Boross, G.; Kemény, L.; Müller, V.; Lenz, T. L.; Papp, B.; Pál, C.: Pathogen diversity drives the evolution of generalist MHC-II alleles in human populations. PLoS Biology 17 (1), e3000131 (2019)

MPG.PuRe

Journal Article

Merlin, C.; Liedvogel, M.: The genetics and epigenetics of animal migration and orientation: birds, butterflies and beyond. Journal of Experimental Biology 222, jeb191890 (2019)

MPG.PuRe

Journal Article

Möller, M.; Hindersin, L.; Traulsen, A.: Exploring and mapping the universe of evolutionary graphs identifies structural properties affecting fixation probability and time. Communications Biology 2, 137 (2019)

MPG.PuRe

Journal Article

Näpflin, K.; O’Connor, E. A.; Becks, L.; Bensch, S.; Ellis, V. A.; Hafer-Hahmann, N.; Harding, K. C.; Lindén, S. K.; Olsen, M. T.; Roved, J. et al.; Sackton, T. B.; Shultz, A. J.; Venkatakrishnan, V.; Videvall, E.; Westerdahl, H.; Winternitz, J. C.; Edwards, S. V.: Genomics of host-pathogen interactions: challenges and opportunities across ecological and spatiotemporal scales. PeerJ 7, e8013 (2019)

MPG.PuRe

Journal Article

Nega, M.; Braun, B.; Künzel, S.; Szewzyk, U.: Evaluating the impact of wastewater effluent on microbial communities in the Panke, an Urban River. Water 11 (5), 888 (2019)

MPG.PuRe

Journal Article

Park, H. J.; Pichugin, Y.; Huang, W.; Traulsen, A.: Population size changes and extinction risk of populations driven by mutant interactors. Physical Review E 99, 022305 (2019)

MPG.PuRe

Journal Article

Piecyk, A.; Roth, O.; Kalbe, M.: Specificity of resistance and geographic patterns of virulence in a vertebrate host-parasite system. BMC Evolutionary Biology 19, 80 (2019)

MPG.PuRe

Journal Article

Retel, C.; Kowallik, V.; Huang, W.; Werner, B.; Künzel, S.; Becks, L.; Feulner, P. G. D.: The feedback between selection and demography shapes genomic diversity during coevolution. Science Advances 5 (10), eaax0530 (2019)

MPG.PuRe

Journal Article

Ricaurte, L. F.; Patiño, J. E.; Zambrano, D. F. R.; Arias-G, J. C.; Acevedo, O.; Aponte, C.; Medina, R.; González, M.; Rojas, S.; Flórez, C. et al.; Estupinan-Suarez, L. M.; Jaramillo, Ú.; Santos, A. C.; Lasso, C. A.; Nivia, A. A. D.; Calle, S. R.; Vélez, J. I.; Acosta, J. H. C.; Duque, S. R.; Núñez-Avellaneda, M.; Correa, I. D.; Rodríguez-Rodríguez, J. A.; Q, V.; P., S.; Prieto-C, A.; Rudas-Ll, A.; Cleef, A. M.; Finlayson, C. M.; Junk, W. J.: A Classification System for Colombian Wetlands: an Essential Step Forward in Open Environmental Policy-Making. Wetlands: journal of the Society of Wetland Scientists (2019)

MPG.PuRe

Journal Article

Richards, J. K.; Stukenbrock, E. H.; Carpenter, J.; Liu, Z.; Cowger, C.; Faris, J. D.; Friesen, T. L.: Local adaptation drives the diversification of effectors in the fungal wheat pathogen Parastagonospora nodorum in the United States. PLoS Genetics 15 (10), e1008223 (2019)

MPG.PuRe