Max Planck Institute for Evolutionary Biology

Publications of the Institute

Our institute uses MPG.PuRe (repository) to record the publications of its scientists. Unfortunately, our institute bibliography is not complete. The list should be complete from 1998 onwards. In addition, all publications of the former branch in Schlitz (river station) from 1949 to 2007 are included.

Journal Article (137)

2021

Journal Article

Pagliuca, S.; Gurnari, C.; Awada, H.; Kishtagari, A.; Kongkiatkamon, S.; Terkawi, L.; Zawit, M.; Guan, Y.; LaFramboise, T.; Jha, B. K. et al.; Patel, B. J.; Hamilton, B. K.; Majhail, N. S.; Lundgren, S.; Mustjoki, S.; Saunthararajah, Y.; Visconte, V.; Chan, T. A.; Yang, C.-Y.; Lenz, T. L.; Maciejewski, J. P.: The similarity of class II HLA genotypes defines patterns of autoreactivity in idiopathic bone marrow failure disorders. Blood 138 (26), pp. 2781 - 2798 (2021)

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COVID-19 Host Genetics initiative; including authors; Lenz, T. L.; Teles, A.; Azuure, C.; Özer, O.; Niemi, M. E. K.; Karjalainen, J.; Liao, R. G.; Neale, B. M. et al.; Daly, M.; Ganna, A.; Pathak, G. A.; Andrews, S. J.; Kanai, M.; Veerapen, K.; Fernandez-Cadenas, I.; Schulte, E. C.; Striano, P.; Marttila, M.; Minica, C.; Marouli, E.; Karim, M. A.; Wendt, F. R.; Savage, J.; Sloofman, L.; Butler-Laporte, G.; Kim, H.-N.; Kanoni, S.; Okada, Y.; Byun, J.; Han, Y.; Uddin, M. J.; Smith, G. D.; Willer, C. J.; Buxbaum, J. D.; Mehtonen, J.; Finucane, H.; Cordioli, M.; Martin, A. R.; Zhou, W.; Pasaniuc, B.; Julienne, H.; Aschard, H.; Shi, H.; Yengo, L.; Polimanti, R.; Ghoussaini, M.; Schwartzentruber, J.; Dunham, I.; Chwialkowska, K.; Francescatto, M.; Trankiem, A.; Balaconis, M. K.; Davis, L.; Lee, S.; Priest, J.; Renieri, A.; Sankaran, V. G.; van Heel, D.; Deelen, P.; Richards, J. B.; Nakanishi, T.; Biesecker, L.; Kerchberger, V. E.; Baillie, J. K.; Mari, F.; Bernasconi, A.; Baillie, S. C.; Canakoglu, A.; Wolford, B.; Faucon, A.; Dutta, A. K.; Schurmann, C.; Harry, E.; Birney, E.; Nguyen, H.; Nasir, J.; Kaunisto, M.; Solomonson, M.; Dueker, N.; Vadgama, N.; Limou, S.; Rahmouni, S.; Mbarek, H.; Darwish, D.; Uddin, M. M.; Albertos, R.; Pérez-Tur, J.; Li, R.; Folkersen, L.; Moltke, I.; Koelling, N.; Teumer, A.; Kousathanas, A.; Utrilla, A.; Verdugo, R. A.; Zárate, R.; Medina-Gómez, C.; Gómez-Cabrero, D.; Carnero-Montoro, E.; Cadilla, C. L.; Moreno-Estrada, A.; Garmendia, A.; Moya, L.; Sedaghati-Khayat, B.; Boua, P. R.; Favé, M.-J.; Francioli, L.; Lemaçon, A.; Migeotte, I.; Patel, S.; Varnai, R.; Szentpeteri, J. L.; Sipeky, C.; Colombo, F.; von Hohenstaufen, K.; Lio, P.; Vallerga, C.; Wang, Q.; Tanigawa, Y.; Im, H.; Han, C.; Song, H.; Lim, J.; Lee, Y.; Kim, S.; Im, S.; Atanasovska, B.; Ahmad, H. F.; Boer, C.; Jansen, P.; Franke, L.; Kaja, E.; Pasko, D.; Kennis-Szilagyi, I.; Kornilov, S. A.; Prijatelj, V.; Prokić, I.; Sivanadhan, I.; Perumal, S.; Esmaeeli, S.; Pearson, N. M.; Auton, A.; Shelton, J. F.; Shastri, A. J.; Filshtein-Sonmez, T.; Coker, D.; Symons, A.; Esparza-Gordillo, J.; Aslibekyan, S.; O’Connell, J.; Ye, C.; Weldon, C. H.; Perera, M.; O’Leary, K.; Tuck, M.; O’Brien, T.; Meltzer, D.; O’Donnell, P.; Nutescu, E.; Yang, G.; Alarcon, C.; Herrmann, S.; Mazurek, S.; Banagan, J.; Hamidi, Z.; Barbour, A.; Raffat, N.; Moreno, D.; Friedman, P.; Ferwerda, B.; van de Beek, D.; Brouwer, M. C.; Vlaar, A. P. J.; Wiersinga, W. J.; Posthuma, D.; Tissink, E.; Zwinderman, K. H. A.; Uffelmann, E.; van Agtmael, M.; Algera, A. G.; van Baarle, F.; Bax, D.; Beudel, M.; Jan Bogaard, H.; Bomers, M.; Bonta, P. I.; Bos, L.; Botta, M.; de Brabander, J.; de Bree, G.; de Bruin, S.; Bugiani, M.; Bulle, E.; Chouchane, O.; Cloherty, A.; Dongelmans, D.; Elbers, P.; Fleuren, L.; Geerlings, S.; Geerts, B.; Geijtenbeek, T.; Girbes, A.; Goorhuis, B.; Grobusch, M. P.; Hafkamp, F.; Hagens, L.; Hamann, J.; Harris, V.; Hemke, R.; Hermans, S. M.; Heunks, L.; Hollmann, M.; Horn, J.; Hovius, J. W.; de Jong, D. M.; Koning, R.; van Mourik, N.; Nellen, J.; Nossent, E. J.; Paulus, F.; Peters, E.; van der Poll, T.; Preckel, B.; Prins, J. M.; Raasveld, J.; Reijnders, T.; Schinkel, M.; Schultz, M. J.; Schuurman, A.; Sigaloff, K.; Smit, M.; Stijnis, C. S.; Stilma, W.; Teunissen, C.; Thoral, P.; Tsonas, A.; van der Valk, M.; Veelo, D.; de Vries, H.; van Vugt, M.; Wouters, D.; Minnaar, R. P.; Kromhout, A.; van Uffelen, J. K. W.; Wolterman, R. A.; Roberts, G.; Park, D.; Ball, C. A.; Coignet, M.; McCurdy, S.; Knight, S.; Partha, R.; Rhead, B.: Mapping the human genetic architecture of COVID-19. Nature 600 (7889), pp. 472 - 477 (2021)

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Hamilton, M.; Mascioni, M.; Hehenberger, E.; Bachy, C.; Yung, C.; Vernet, M.; Worden, A. Z.: Spatiotemporal variations in Antarctic protistan communities highlight phytoplankton diversity and seasonal dominance by a novel cryptophyte lineage. mBio 12 (6), e02973-21 (2021)

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Miller, M. E.; Nazareno, E. S.; Rottschaefer, S. M.; Riddle, J.; Dos Santos Pereira, D.; Li, F.; Nguyen-Phuc, H.; Henningsen, E. C.; Persoons, A.; Saunders, D. G. O. et al.; Stukenbrock, E. H.; Dodds, P. N.; Kianian, S. F.; Figueroa, M.: Increased virulence of Puccinia coronata f. sp.avenae populations through allele frequency changes at multiple putative Avr loci. PLoS Genetics 16 (12), e1009291 (2021)

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Nottmeier, C.; Liao, N.; Simon, A.; Decker, M.G.; Luther, J.; Schweizer, M.; Yorgan, T.; Kaucka, M.; Bockamp, E.; Kahl-Nieke, B. et al.; Amling, M.; Schinke, T.; Petersen, J.; Koehne, T.: Wnt1 promotes cementum and alveolar bone growth in a time-dependent manner. Journal of Dental Research 100 (13), pp. 1501 - 1509 (2021)

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Prabh, N.; Tautz, D.: Frequent lineage-specific substitution rate changes support an episodic model for protein evolution. G3: Genes, Genomes, Genetics 11 (12), jkab333 (2021)

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Rao, S.; Ngan, W. Y.; Chan, L. C.; Sekoai, P. T.; Fung, A. H. Y.; Pu, Y.; Yao, Y.; Habimana, O.: Questioning the source of identified non-foodborne pathogens from food-contact wooden surfaces used in Hong Kong's urban wet markets. One Health 13, 100300 (2021)

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Filatova, S.; Claassen, B.; Torres, G.; Krause-Kyora, B.; Stukenbrock, E. H.; Kirleis, W.: Toward an investigation of diversity and cultivation of rye (Secale cereale ssp. cereale L.) in Germany: methodological insights and first results from early modern plant material. Agronomy 11, 2451 (2021)

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Bertels, F.; Metzner, K. J.; Regoes, R. R.: Convergent evolution as an indicator for selection during acute HIV-1 infection. Peer Community Journal 1, e4 (2021)

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Arnone, D.; Vallier, M.; Hergalant, S.; Chabot, C.; Ndiaye, N. C.; Moulin, D.; Aignatoaei, A.-M.; Alberto, J.-M.; Louis, H.; Boulard, O. et al.; Mayeur, C.; Dreumont, N.; Peuker, K.; Strigli, A.; Zeissig, S.; Hansmannel, F.; Chamaillard, M.; Kökten, T.; Peyrin-Biroulet, L.: Long-term overconsumption of fat and sugar causes a partially reversible pre-inflammatory bowel disease state. Frontiers in Nutrition 8, 758518 (2021)

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Strigli, A.; Gopalakrishnan, S.; Zeissig, Y.; Basic, M.; Wang, J.; Schwerd, T.; Doms, S.; Peuker, K.; Hartwig, J.; Harder, J. et al.; Hönscheid, P.; Arnold, P.; Kurth, T.; Rost, F.; Petersen, B.-S.; Forster, M.; Franke, A.; Kelsen, J. R.; Rohlfs, M.; Klein, C.; Muise, A. M.; Warner, N.; Nambu, R.; Mayerle, J.; Török, H.-P.; Linkermann, A.; Muders, M. H.; Baretton, G. B.; Hampe, J.; Aust, D. E.; Baines, J. F.; Bleich, A.; Zeissig, S.: Deficiency in X-linked inhibitor of apoptosis protein promotes susceptibility to microbial triggers of intestinal inflammation. Science Immunology 6 (65), eabf7473 (2021)

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Vajedsamiei, J.; Melzner, F.; Raatz, M.; Morón Lugo, S. C.; Pansch, C.: Cyclic thermal fluctuations can be burden or relief for an ectotherm depending on fluctuations’ average and amplitude. Functional Ecology 35 (11), pp. 2483 - 2496 (2021)

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Habig, M.; Lorrain, C.; Feurtey, A.; Komluski, J.: Epigenetic modifications affect the rate of spontaneous mutations in a pathogenic fungus. Nature Communications 12, 5869 (2021)

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Keshavarz, M.; Savriama, Y.; Refki, P.; Reeves, R. G.; Tautz, D.: Natural copy number variation of tandemly repeated regulatory SNORD RNAs leads to individual phenotypic differences in mice. Molecular Ecology 30 (19), pp. 4708 - 4722 (2021)

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Mafessoni, F.; Lachmann, M.; Gokhale, C. S.: On the fitness of informative cues in complex environments. Journal of Theoretical Biology 527, 110819 (2021)

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Özer, O.; Lenz, T. L.: Unique pathogen peptidomes facilitate pathogen-specific selection and specialization of MHC alleles. Molecular Biology and Evolution 38 (10), pp. 4376 - 4387 (2021)

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Schmid, L.; Chatterjee, K.; Hilbe, C.; Nowak, M. A.: A unified framework of direct and indirect reciprocity. Nature Human Behaviour 5, pp. 1292 - 1302 (2021)

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Snoek, B. L.; Sterken, M. G.; Nijveen, H.; Volkers, R. J. M.; Riksen, J.; Rosenstiel, P. C.; Schulenburg, H.; Kammenga, J. E.: The genetics of gene expression in a Caenorhabditis elegans multiparental recombinant inbred line population. G3: Genes, Genomes, Genetics 11 (10), jkab258 (2021)

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Traulsen, A.; Sieber, M.: Evolutionary ecology theory — microbial population structure. Current Opinion in Microbiology 63, pp. 216 - 220 (2021)

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Zárate-Potes, A.; Yang, W.; Andresen, B.; Nakad, R.; Haase, D.; Rosenstiel, P.; Dierking, K.; Schulenburg, H.: The effects of nested miRNAs and their host genes on immune defense against Bacillus thuringiensis infection in Caenorhabditis elegans. Developmental & Comparative Immunology 123, 104144 (2021)

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Weidenbach, K.; Wolf, S.; Kupczok, A.; Kern, T.; Fischer, M. A.; Reetz, J.; Urbańska, N.; Künzel, S.; Schmitz, R. A.; Rother, M.: Characterization of BLF4, an archaeal lytic virus targeting a member of the Methanomicrobiales. Viruses 13 (10), 1934 (2021)

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Spanner, R.; Taliadoros, D.; Richards, J.; Rivera-Varas, V.; Neubauer, J.; Natwick, M.; Hamilton, O.; Vaghefi, N.; Pethybridge, S.; Secor, G. A. et al.; Friesen, T. L.; Stukenbrock, E. H.; Bolton, M. D.: Genome-wide association and selective sweep studies reveal the complex genetic architecture of DMI fungicide resistance in Cercospora beticola. Genome Biology and Evolution 13 (9), evab209 (2021)

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Echeverría‐Galindo, P.; Anslan, S.; Frenzel, P.; Künzel, S.; Vences, M.; Pérez, L.; Börner, N.; Kang, W.; Schwarz, A.; Wang, J. et al.; Peng, P.; Zhu, L.; Schwalb, A.: High‐throughput identification of non‐marine Ostracoda from the Tibetan Plateau: Evaluating the success of various primers on sedimentary DNA samples. Environmental DNA 3 (5), pp. 982 - 996 (2021)

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Fritsch, A. W.; Diaz-Delgadillo, A. F.; Adame-Arana, O.; Hoege, C.; Mittasch, M.; Kreysing, M.; Leaver, M.; Hyman, A. A.; Jülicher, F.; Weber, C. A.: Local thermodynamics govern formation and dissolution of Caenorhabditis elegans P granule condensates. Proceedings of the National Academy of Sciences of the United States of America 118 (37), e2102772118 (2021)

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Kahnau, P.; Guenther, A.; Boon, M. N.; Terzenbach, J. D.; Hanitzsch, E.; Lewejohann, L.; Brust, V.: Lifetime observation of cognition and physiological parameters in male mice. Frontiers in Behavioral Neuroscience 15, 709775 (2021)

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Obeng, N.; Bansept, F.; Sieber, M.; Traulsen, A.; Schulenburg, H.: Evolution of microbiota–host associations: the microbe’s perspective. Trends in Microbiology 29 (9), pp. 779 - 787 (2021)

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Piecyk, A.; Hahn, M. A.; Roth, O.; Dheilly, N. M.; Heins, D. C.; Bell, M. A.; Kalbe, M.: Cross-continental experimental infections reveal distinct defence mechanisms in populations of the three-spined stickleback Gasterosteus aculeatus. Proceedings of the Royal Society B: Biological Sciences 288 (1959), 20211758 (2021)

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von Merten, S.; Pfeifle, C.; Künzel, S.; Hoier, S.; Tautz, D.: A humanized version of Foxp2 affects ultrasonic vocalization in adult female and male mice. Genes, Brain and Behavior 20 (7), e12764 (2021)

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Waichman, I.; Requate, T.; Karde, M.; Milinski, M.: Challenging conventional wisdom: Experimental evidence on heterogeneity and coordination in avoiding a collective catastrophic event. Journal of Environmental Economics and Management 109, 102502 (2021)

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Yaryhin, O.; Klembara, J.; Pichugin, Y.; Kaucka, M.; Werneburg, I.: Limb reduction in squamate reptiles correlates with the reduction of the chondrocranium: A case study on serpentiform anguids. Developmental Dynamics 250 (9), pp. 1300 - 1317 (2021)

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Spiecker, L.; Leberecht, B.; Langebrake, C.; Laurien, M.; Apte, S. R.; Mouritsen, H.; Gerlach, G.; Liedvogel, M.: Endless skies and open seas – how birds and fish navigate. Neuroforum 27 (3), pp. 127 - 139 (2021)

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Pereira, D.; Oggenfuss, U.; McDonald, B. A.; Crol, D.: Population genomics of transposable element activation in the highly repressive genome of an agricultural pathogen. Microbial Genomics 7, 000540 (2021)

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Gedman, G.; Haase, B.; Durieux, G.; Biegler, M. T.; Fedrigo, O.; Jarvis, E. D.: As above, so below: whole transcriptome profiling demonstrates strong molecular similarities between avian dorsal and ventral pallial subdivisions. The Journal of Comparative Neurology 529 (12), pp. 3222 - 3246 (2021)

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Haubold, B.; Klötzl, F.; Hellberg, L.; Thompson, D.; Cavalar, M.: Fur: Find unique genomic regions for diagnostic PCR. Bioinformatics 37 (15), pp. 2081 - 2087 (2021)

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Heckwolf, M. J.; Meyer, B. S.: The time is ripe for functional genomics: Can epigenetic changes mediate reproductive timing? Molecular Ecology 30 (15), pp. 3641 - 3644 (2021)

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Lightfoot, J. W.; Dardiry, M.; Kalirad, A.; Giaimo, S.; Eberhardt, G.; Witte, H.; Wilecki, M.; Rödelsperger, C.; Traulsen, A.; Sommer, R. J.: Sex or cannibalism: Polyphenism and kin recognition control social action strategies in nematodes. Science Advances 7 (35), eabg8042 (2021)

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Uecker, H.; Bonhoeffer, S.: Antibiotic treatment protocols revisited: the challenges of a conclusive assessment by mathematical modelling. Journal of the Royal Society Interface 18 (181), 20210308 (2021)

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Pérez-Laguna, V.; Barrena-López, Y.; Gilaberte, Y.; Rezusta, A.: In vitro effect of photodynamic therapy with different lights and combined or uncombined with chlorhexidine on Candida spp. Pharmaceutics 13 (8), 1176 (2021)

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Batra, A.; Römhild, R.; Rousseau, E.; Franzenburg, S.; Niemann, S.; Schulenburg, H.: High potency of sequential therapy with only β-lactam antibiotics. eLife 10, e68876 (2021)

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De Monte, S.: Ecological recipes for selecting community function. Nature Ecology & Evolution 5 (7), pp. 894 - 895 (2021)

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Haller, M.; Bonczarowska, J. H.; Rieger, D.; Lenz, T. L.; Nebel, A.; Krause-Kyora, B.: Ancient DNA study in medieval Europeans shows an association between HLA-Drb1*03 and paratyphoid fever. Frontiers in immunology 12, 691475 (2021)

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Kaiser, T. S.; Neumann, J.: Circalunar clocks—Old experiments for a new era. Bioessays 43 (8), 2100074 (2021)

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Pérez-Laguna, V.; García-Luque, I.; Ballesta, S.; Rezusta, A.; Gilaberte, Y.: Photodynamic therapy combined with antibiotics or antifungals against microorganisms that cause skin and soft tissue infections: a planktonic and biofilm approach to overcome resistances. Pharmaceuticals / Molecular Diversity Preservation International 14 (7), 603 (2021)

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Boynton, P. J.; Wloch-Salamon, D.; Landermann, D.; Stukenbrock, E. H.: Forest Saccharomyces paradoxus are robust to seasonal biotic and abiotic changes. Ecology and Evolution 11 (11), pp. 6604 - 6619 (2021)

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Bonthond, G.; Bayer, T.; Krueger-Hadfield, S. A.; Stärck, N.; Wang, G.; Nakaoka, M.; Künzel, S.; Weinberger, F.: The role of host promiscuity in the invasion process of a seaweed holobiont. The ISME Journal 15 (6), pp. 1668 - 1679 (2021)

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Czuppon, P.; Blanquart, F.; Uecker, H.; Débarre, F.: The effect of habitat choice on evolutionary rescue in subdivided populations. The American Naturalist 197 (6), pp. 625 - 643 (2021)

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Czuppon, P.; Traulsen, A.: Understanding evolutionary and ecological dynamics using a continuum limit. Ecology and Evolution 11 (11), pp. 5857 - 5873 (2021)

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Gardère, M. L.; Florence, J.; Muller, S.; Savriama, Y.; Dubuisson, J.-Y.: Codonographia Gorgonum, or the description of a pleiad of bellflowers (Campanula, Campanulaceae) from the Cabo Verde archipelago. Candollea 76 (1), pp. 13 - 40 (2021)

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Genau, A. C.; Li, Z.; Renzaglia, K. S.; Fernandez Pozo, N.; Nogué, F.; Haas, F. B.; Wilhelmsson, P. K. I.; Ullrich, K. K.; Schreiber, M.; Meyberg, R. et al.; Grosche, C.; Rensing, S. A.: HAG1 and SWI3A/B control of male germ line development in P. patens suggests conservation of epigenetic reproductive control across land plants. Plant Reproduction 34 (2), pp. 149 - 173 (2021)

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Lafuente, E.; Alves, F.; King, J. G.; Peralta, C. M.; Beldade, P.: Many ways to make darker flies: Intra‐ and interspecific variation in Drosophila body pigmentation components. Ecology and Evolution 11, pp. 8136 - 8155 (2021)

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Schulz, N.; Belheouane, M.; Dahmen, B.; Ruan, V. A.; Specht, H. E.; Dempfle, A.; Herpertz-Dahlmann, B.; Baines, J. F.; Seitz, J.: Gut microbiota alteration in adolescent anorexia nervosa does not normalize with short-term weight restoration. International Journal of Eating Disorders 54 (6), pp. 1969 - 980 (2021)

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Venkateswaran, V. R.; Roth, O.; Gokhale, C. S.: Consequences of combining sex-specific traits. Evolution: international journal of organic evolution 75 (6), pp. 1274 - 1287 (2021)

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Geoffroy, F.; André, J.-B.: The emergence of cooperation by evolutionary generalization. Proceedings of the Royal Society B: Biological Sciences 288 (1951), 20210338 (2021)

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Soyer, J. L.; Clairet, C.; Gay, E. J.; Lapalu, N.; Rouxel, T.; Stukenbrock, E. H.; Fudal, I.: Genome-wide mapping of histone modifications in two species of Leptosphaeria maculans showing contrasting genomic organization and host specialization. Chromosome Research 29, pp. 219 - 236 (2021)

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Dubois, J.; Rueger, J.; Haubold, B.; Far, R. K.-K.; Sczakiel, G.: Transcriptome analyses of urine RNA reveal tumor markers for human bladder cancer: validated amplicons for RT-qPCR-based detection. Oncotarget 12, pp. 1011 - 1023 (2021)

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Guenther, A.; Eweleit, L.; Trillmich, F.: Fitness consequences of seasonally different life histories? A match–mismatch experiment. Behavioral Ecology 32 (3), pp. 500 - 507 (2021)

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Lagator, M.; Uecker, H.; Neve, P.: Adaptation at different points along antibiotic concentration gradients. Biology Letters 17 (5), 20200913 (2021)

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Milinski, M.: MHC mediates social odor via microbiota—it cannot work: a comment on Schubert et al. Behavioral Ecology 32 (3), pp. 374 - 375 (2021)

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Schweizer, G.; Haider, M. B.; Barroso, G. V.; Rossel, N.; Munch, K.; Kahmann, R.; Dutheil, J. Y.: Population genomics of the maize pathogen Ustilago maydis: demographic history and role of virulence clusters in adaptation. Genome Biology and Evolution 13 (5), evab073 (2021)

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Gogarten, J. F.; Rühlemann, M.; Archie, E.; Tung, J.; Akoua-Koffi, C.; Bang, C.; Deschner, T.; Muyembe-Tamfun, J.-J.; Robbins, M. M.; Schubert, G. et al.; Surbeck, M.; Wittig, R. M.; Zuberbühler, K.; Baines, J. F.; Franke, A.; Leendertz, F. H.; Calvignac-Spencer, S.: Primate phageomes are structured by superhost phylogeny and environment. Proceedings of the National Academy of Sciences of the United States of America 118 (15), e2013535118 (2021)

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Galeev, A.; Suwandi, A.; Cepic, A.; Basu, M.; Baines, J. F.; Grassl, G. A.: The role of the blood group-related glycosyltransferases FUT2 and B4GALNT2 in susceptibility to infectious disease. International Journal of Medical Microbiology 311, 151487 (2021)

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Lorrain, C.; Feurtey, A.; Möller, M.; Haueisen, J.; Stukenbrock, E. H.: Dynamics of transposable elements in recently diverged fungal pathogens: lineage-specific transposable element content and efficiency of genome defences. G3: Genes, Genomes, Genetics 11 (4), jkab068 (2021)

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Matula, J.; Tesarova, M.; Zikmund, T.; Kaucka, M.; Adameyko, I.; Kaiser, J.: X-ray microtomography–based atlas of mouse cranial development. GigaScience 10 (3), giab012 (2021)

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Park, H. J.; Gokhale, C. S.; Bertels, F.: How sequence populations persist inside bacterial genomes. Genetics 217 (7), iyab027 (2021)

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Pees, B.; Yang, W.; Kloock, A.; Petersen, C.; Peters, L.; Fan, L.; Friedrichsen, M.; Butze, S.; Zárate-Potes, A.; Schulenburg, H. et al.; Dierking, K.: Effector and regulator: diverse functions of C. elegans C-type lectin-like domain proteins. PLoS Pathogens 17, e1009454 (2021)

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Soluch, R.; Hülter, N. F.; Romero Picazo, D.; Özkurt, E.; Stukenbrock, E. H.; Dagan, T.: Colonization dynamics of Pantoea agglomeransin the wheat root habitat. Environmental Microbiology 23, pp. 2260 - 2273 (2021)

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Vasighzadeh, A.; Sharifnabi, B.; Javan-Nikkhah, M.; Seifollahi, E.; Landermann-Habetha, D.; Feurtey, A.; Holtgrewe-Stukenbrock, E.: Population genetic structure of four regional populations of the barley pathogen Pyrenophora teres f. maculata in Iran is characterized by high genetic diversity and sexual recombination. Plant Pathology 70 (3), pp. 735 - 744 (2021)

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Möller, M.; Habig, M.; Lorrain, C.; Feurtey, A.; Haueisen, J.; Fagundes, W. C.; Alizadeh, A.; Freitag, M.; Stukenbrock, E. H.: Recent loss of the Dim2 DNA methyltransferase decreases mutation rate in repeats and changes evolutionary trajectory in a fungal pathogen. PLoS Genetics 17 (3), e1009448 (2021)

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Zhang, W.; Reeves, G.; Tautz, D.: Testing implications of the omnigenic model for the genetic analysis of Loci identified through genome-wide association. Current Biology 31 (5), pp. 1092.e1 - 1098.e6 (2021)

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Fuhrmann, N.; Kaiser, T. S.: The importance of DNA barcode choice in biogeographic analyses — a case study on marine midges of the genus Clunio. Genome 64, pp. 242 - 252 (2021)

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Sieber, M.; Traulsen, A.; Schulenburg, H.; Douglas, A. E.: On the evolutionary origins of host–microbe associations. Proceedings of the National Academy of Sciences 118 (9), e2016487118 (2021)

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Degenhardt, F.; Mayr, G.; Wendorff, M.; Boucher, G.; Ellinghaus, E.; Ellinghaus, D.; El Abd, H.; Rosati, E.; Hübenthal, M.; Juzenas, S. et al.; Abedian, S.; Vahedi, H.; BK, T.; Yang, S.-K.; Ye, B. D.; Cheon, J. H.; Datta, L. W.; Daryani, N. E.; Ellul, P.; Esaki, M.; Fuyuno, Y.; McGovern, D. P.; Haritunians, T.; Hong, M.; Juyal, G.; Jung, E. S.; Kubo, M.; Kugathasan, S.; Lenz, T. L.; Leslie, S.; Malekzadeh, R.; Midha, V.; Motyer, A.; Ng, S.; Okou, D.; Raychaudhuri, S.; Schembri, J.; Schreiber, S.; Song, K.; Sood, A.; Takahashi, A.; Torres, E.; Umeno, J.; Alizadeh, B.; Weersma, R.; Wong, S.; Yamazaki, K.; Karlsen, T.; Rioux, J.; Brant, S.; Franke, A.: Transethnic analysis of the human leukocyte antigen region for ulcerative colitis reveals not only shared but also ethnicity-specific disease associations. Human Molecular Genetics 30 (5), pp. 356 - 369 (2021)

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Ebert, M. K.; Rangel, L. I.; Spanner, R. E.; Taliadoros, D.; Wang, X.; Friesen, T. L.; de Jonge, R.; Neubauer, J. D.; Secor, G. A.; Thomma, B. P. H. J. et al.; Stukenbrock, E. H.; Bolton, M. D.: Identification and characterization of Cercospora beticola necrosis-inducing effector CbNip1. Molecular Plant Pathology 22 (3), pp. 301 - 316 (2021)

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Marxsen, J.; Rütz, N. K.; Schmidt, S. I.: Organic carbon and nutrients drive prokaryote and metazoan communities in a floodplain aquifer. Basic and Applied Ecology 51, pp. 43 - 58 (2021)

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Vajedsamiei, J.; Melzner, F.; Raatz, M.; Kiko, R.; Khosravi, M.; Pansch, C.: Simultaneous recording of filtration and respiration in marine organisms in response to short-term environmental variability. Limnology and Oceanography: Methods 19 (3), pp. 196 - 209 (2021)

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Kaiser, T. S.; Haeseler, A. v.; Tessmar-Raible, K.; Heckel, D. G.: Timing strains of the marine insect Clunio marinus diverged and persist with gene flow. Molecular Ecology 30 (5), pp. 1264 - 1280 (2021)

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Vrbanec, , L.; Matijević, V.; Guenther, A.: Enhanced problem-solving ability as an adaptation to urban environments in house mice. Proceedings of the Royal Society B: Biological Sciences 288 (1945), 20202504 (2021)

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Croll, D.; Crous, P.W.; Pereira, D.; Mordecai, E.A.; McDonald, B.A.; Brunner, P.C.: Genome-scale phylogenies reveal relationships among Parastagonospora species infecting domesticated and wild grasses. Persoonia 46, pp. 116 - 128 (2021)

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Barbosa, C.; Mahrt, N.; Bunk, J.; Graßer, M.; Rosenstiel, P.; Jansen, G.; Schulenburg, H.: The genomic basis of rapid adaptation to antibiotic combination therapy in Pseudomonas aeruginosa. Molecular Biology and Evolution 38 (2), pp. 449 - 464 (2021)

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Cordero, G. A.; Maliuk, A.; Schlindwein, X.; Werneburg, I.; Yaryhin, O.: Phylogenetic patterns and ontogenetic origins of limb length variation in ecologically diverse lacertine lizards. Biological Journal of the Linnean Society 132 (2), pp. 283 - 296 (2021)

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Kang, W.; Anslan, S.; Börner, N. B.; Schwarz, A.; Schmidt, R.; Künzel, S.; Rioual, P.; Echeverría-Galindo, P.; Vences, M.; Wang, J. et al.; Schwalb, A.: Diatom metabarcoding and microscopic analyses from sediment samples at Lake Nam Co, Tibet: The effect of sample-size and bioinformatics on the identified communities. Ecological Indicators 121, 107070 (2021)

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Mazza, V.; Guenther, A.: City mice and country mice: innovative problem solving in rural and urban noncommensal rodents. Animal Behaviour 172, pp. 197 - 210 (2021)

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Nowell, R. W.; Wilson, C. G.; Almeida, P.; Schiffer, P. H.; Fontaneto, D.; Becks, L.; Rodriguez, F.; Arkhipova, I. R.; Barraclough, T. G.: Evolutionary dynamics of transposable elements in bdelloid rotifers. eLife 10, e63194 (2021)

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Rühlemann, M. C.; Hermes, B.; Bang, C.; Doms, S.; Moitinho-Silva, L.; Thingholm, L. B.; Frost, F.; Degenhardt, F.; Wittig, M.; Kässens, J. et al.; Weiss, F. U.; Peters, A.; Neuhaus, K.; Völker, U.; Völzke, H.; Homuth, G.; Weiss, S.; Grallert, H.; Laudes, M.; Lieb, W.; Haller, D.; Lerch, M. M.; Baines, J. F.; Franke, A.: Genome-wide association study in 8,956 German individuals identifies influence of ABO histo-blood groups on gut microbiome. Nature Genetics 53 (2), pp. 147 - 155 (2021)

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Riley, E. P.; López-Garrido, J.; Sugie, J.; Liu, R. B.; Pogliano, K.: Metabolic differentiation and intercellular nurturing underpin bacterial endospore formation. Science Advances 7, eabd6385 (2021)

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Almalik, A. M. A.; Reeves, R. G.; Azrag, R. S.: Comparison of the temporal efficacy of Aquatain surface films for the control of Anopheles arabiensis and Ochlerotatus caspius larvae from Sudan. Royal Society Open Science 8 (2), 200980 (2021)

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Almalki, F.; Nonnecke, E. B.; Castillo, P. A.; Bevin-Holder, A.; Ullrich, K. K.; Lönnerdal, B.; Odenthal-Hesse, L.; Bevins, C. L.; Hollox, E. J.: Extensive variation in the intelectin gene family in laboratory and wild mouse strains. Scientific Reports 11, 15548 (2021)

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Anslan, S.; Li, H.; Künzel, S.; Vences, M.: Microbiomes from feces vs. gut in tadpoles: distinct community compositions between substrates and preservation methods. SALAMANDRA - German Journal of Herpetology 57 (1), pp. 96 - 104 (2021)

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Anslan, S.; Sachs, M.; Rancilhac, L.; Brinkmann, H.; Petersen, J.; Künzel, S.; Schwarz, A.; Arndt, H.; Kerney, R.; Vences, M.: Diversity and substrate-specificity of green algae and other micro-eukaryotes colonizing amphibian clutches in Germany, revealed by DNA metabarcoding. The Science of Nature 108, 29 (2021)

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Bansept, F.; Obeng, N.; Schulenburg, H.; Traulsen, A.: Modeling host-associating microbes under selection. The ISME Journal 15, pp. 3648 - 3656 (2021)

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supplementary-material

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Basu, M.; Philipp, L.-M.; Baines, J. F.; Sebens, S.: The microbiome tumor axis: how the microbiome could contribute to clonal heterogeneity and disease outcome in pancreatic cancer. Frontiers in Oncology 11, 740606 (2021)

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Bedoya-Reina, O. C.; Li, W.; Arceo, M.; Plescher, M.; Bullova, P.; Pui, H.; Kaucka, M.; Kharchenko, P.; Martinsson, T.; Holmberg, J. et al.; Adameyko, I.; Deng, Q.; Larsson, C.; Juhlin, C. C.; Kogner, P.; Schlisio, S.: Single-nuclei transcriptomes from human adrenal gland reveal distinct cellular identities of low and high-risk neuroblastoma tumors. Nature Communications 12, 5309 (2021)

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Bernardes, J. P.; John, U.; Woltermann, N.; Valiadi, M.; Hermann, R. J.; Becks, L.: The evolution of convex trade-offs enables the transition towards multicellularity. Nature Communications 12, 4222 (2021)

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Botelho, J.; Schulenburg, H.: The role of integrative and conjugative elements in antibiotic resistance evolution. Trends in Microbiology 29 (1), pp. 8 - 18 (2021)

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Bozdag, G. O.; Ono, J.; Denton, J. A.; Karakoc, E.; Hunter, N.; Leu, J.-Y.; Greig, D.: Breaking a species barrier by enabling hybrid recombination. Current Biology 31 (4), pp. R180 - R181 (2021)

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Burmeister, A. R.; Sullivan, R. M.; Gallie, J.; Lenski, R. E.: Sustained coevolution of phage Lambda and Escherichia coli involves inner- as well as outer- membrane defences and counter- defences. Microbiology 167 (5), 001063 (2021)

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Castro, J. F.; Tautz, D.: The effects of sequence length and composition of random sequence peptides on the growth of E. coli cells. Genes 12, 1913 (2021)

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Chebib, J.; Jackson, B. C.; López-Cortegano, E.; Tautz, D.; Keightley, P. D.: Inbred lab mice are not isogenic: genetic variation within inbred strains used to infer the mutation rate per nucleotide site. Heredity 129, pp. 107 - 116 (2021)

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Dégletagne, C.; Abele, D.; Glöckner, G.; Alric, B.; Gruber, H.; Held, C.: Presence of male mitochondria in somatic tissues and their functional importance at the whole animal level in the marine bivalve Arctica islandica. Communications Biology 4, 1104 (2021)

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