Max Planck Institute for Evolutionary Biology

Publications of the Institute

Our institute uses MPG.PuRe (repository) to record the publications of its scientists. Unfortunately, our institute bibliography is not complete. The list should be complete from 1998 onwards. In addition, all publications of the former branch in Schlitz (river station) from 1949 to 2007 are included.

Journal Article (90)

2018

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Gahr, C. L.; Boehm, T.; Milinski, M.: Female assortative mate choice functionally validates synthesized male odours of evolving stickleback river–lake ecotypes. Biology Letters 14 (12), 20180730 (2018)

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Czuppon, P.; Gokhale, C. S.: Disentangling eco-evolutionary effects on trait fixation. Theoretical Population Biology 124, pp. 93 - 107 (2018)

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Flegr, J.; Milinski, M.; Kaňková, Š.; Hůla, M.; Hlaváčová, J.; Sýkorová, K.: Latent toxoplasmosis and olfactory functions of Rh positive and Rh negative subjects. PLoS One 13 (12), e0209773 (2018)

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Irwin, D. E.; Milá, B.; Toews, D. P. L.; Brelsford, A.; Kenyon, H. L.; Porter, A. N.; Grossen, C.; Delmore, K. E.; Alcaide, M.; Irwin, J. H.: A comparison of genomic islands of differentiation across three young avian species pairs. Molecular Ecology 27 (23), pp. 4839 - 4855 (2018)

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Liedvogel, M.: Molekulare Grundlagen und genetische Architektur des Vogelzugs. Vogelwarte - Zeitschrift für Vogelkunde 56 (4), pp. 324 - 325 (2018)

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Uecker, H.: Effectively Evolution-proof Antibiotics? Trends in Microbiology 26 (12), pp. 969 - 970 (2018)

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Armisén, D.; Rajakumar, R.; Friedrich, M.; Benoit, J. B.; Robertson, H. M.; Panfilio, K. A.; Ahn, S.-J.; Poelchau, M. F.; Chao, H.; Dinh, H. et al.; Doddapaneni, H.; Dugan, S.; Gibbs, R. A.; Hughes, D. S.T.; Han, Y.; Lee, S. L.; Murali, S. C.; Muzny, D. M.; Qu, J.; Worley, K. C.; Munoz-Torres, M.; Abouheif, E.; Bonneton, F.; Chen, T.; Childers, C.; Cridge, A. G.; Crumière, A. J. J.; Decaras, A.; Didion, E. M.; Duncan, E.; Elpidina, E. N.; Favé, M.-J.; Finet, C.; Jacobs, C. G. C.; Jarvela, A.; Jennings, E. J.; Jones, J. W.; Lesoway, M. P.; Lovegrove, M.; Martynov, A.; Oppert, B.; Lillico-Ouachour, A.; Rajakumar, A.; Refki, P. N.; Rosendale, A. J.; Santos, M. E.; Toubiana, W.; van der Zee, M.; Jentzsch, I. M. V.; Lowman, A. V.; Viala, S.; Richards, S.; Khila, A.: The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water. BMC Genomics 19, 832 (2018)

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Rogers, D. W.; McConnell, E.; Ono, J.; Greig, D.: Spore-autonomous fluorescent protein expression identifies meiotic chromosome mis-segregation as the principal cause of hybrid sterility in yeast. PLoS Biology 16 (11), e2005066 (2018)

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Giaimo, S.; Arranz, J.; Traulsen, A.: Invasion and effective size of graph-structured populations. PLoS Computational Biology 14 (11), e1006559 (2018)

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Lenz, T. L.; Hafer, N.; Samonte, I. E.; Yeates, S. E.; Milinski, M.: Cryptic haplotype-specific gamete selection yields offspring with optimal MHC immune genes. Evolution 72 (11), pp. 2478 - 2490 (2018)

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Reeves, R. G.; Voeneky, S.; Caetano-Anollés, D.; Beck, F.; Boete, C.: Agricultural research, or a new bioweapon system? Science 362 (6410), pp. 35 - 37 (2018)

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Caetano-Anollés, G.; Nasir, A.; Kim, K. M.; Caetano-Anollés, D.: Rooting phylogenies and the tree of life while minimizing Ad Hoc and auxiliary assumptions. Evolutionary Bioinformatics 14, pp. 1 - 21 (2018)

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Czuppon, P.; Traulsen, A.: Fixation probabilities in populations under demographic fluctuations. Journal of Mathematical Biology 77, pp. 1233 - 1277 (2018)

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Fischer, M. A.; Güllert, S.; Refai, S.; Künzel, S.; Deppenmeier, U.; Streit, W. R.; Schmitz, R. A.: Long-term investigation of microbial community composition and transcription patterns in a biogas plant undergoing ammonia crisis. Microbial Biotechnology 12, pp. 305 - 323 (2018)

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Heer, K.; Ullrich, K. K.; Hiss, M.; Liepelt, S.; Schulze Brüning, R.; Zhou, J.; Opgenoorth, L.; Rensing, S. A.: Detection of somatic epigenetic variation in Norway spruce via targeted bisulfite sequencing. Ecology and Evolution 8 (19), pp. 9672 - 9682 (2018)

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Möller, M.; Habig, M.; Freitag, M.; Stukenbrock, E. H.: Extraordinary genome instability and widespread chromosome rearrangements during vegetative growth. Genetics 210 (2), pp. 517 - 529 (2018)

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Raatz, M.; Schälicke, S.; Sieber, M.; Wacker, A.; Gaedke, U.: One man's trash is another man's treasure—the effect of bacteria on phytoplankton–zooplankton interactions in chemostat systems. Limnology and Oceanography: Methods 16 (10), pp. 629 - 639 (2018)

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Raatz, M.; Schälicke, S.; Sieber, M.; Wacker, A.; Gaedke, U.: One man’s trash is another man’s treasure - the effect of bacteria on phytoplankton-zooplankton interactions in chemostat systems. Limnology and Oceanography: Methods 16 (10), pp. 629 - 639 (2018)

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Yang, S.-G.; Park, H. J.; Kim, B. J.: Dynamic critical behavior of the one-dimensional XY model with a long-range interaction. Physical Review E 98 (3), 032120 (2018)

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Lucek, K.; Keller, I.; Nolte, A. W.; Seehausen, O.: Distinct colonization waves underlie the diversification of the freshwater sculpin (Cottus gobio) in the Central European Alpine region. Journal of Evolutionary Biology 31 (9), pp. 1254 - 1267 (2018)

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Pierini, F.; Lenz, T. L.: Divergent allele advantage at human MHC Genes: signatures of past and ongoing selection. Molecular Biology and Evolution 35 (9), pp. 2145 - 2158 (2018)

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Yıldırım, Y.; Anderson, M. J.; Hansson, B.; Patel, S.; Millar, C. D.; Rainey, P. B.: Genetic structure of the grey side-gilled sea slug (Pleurobranchaea maculata) in coastal waters of New Zealand. PLoS One 13 (8), e0202197 (2018)

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Živanović, B. D.; Ullrich, K. K.; Steffens, B.; Spasić, S. Z.; Galland, P.: The effect of auxin (indole-3-acetic acid) on the growth rate and tropism of the sporangiophore of Phycomyces blakesleeanus and identification of auxin-related genes. Protoplasma 255 (5), pp. 1331 - 1347 (2018)

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Lin, X. B.; Wang, T.; Stothard, P.; Corander, J.; Wang, J.; Baines, J. F.; Knowles, S. C. L.; Baltrūnaitė, L.; Tasseva, G.; Schmaltz, R. et al.; Tollenaar, S.; Cody, L. A.; Grenier, T.; Wu, W.; Ramer-Tait, A. E.; Walter, J.: The evolution of ecological facilitation within mixed-species biofilms in the mouse gastrointestinal tract. The ISME Journal 12 (11), pp. 2770 - 2784 (2018)

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Nishiyama, T.; Sakayama, H.; de Vries, J.; Buschmann, H.; Saint-Marcoux, D.; Ullrich, K. K.; Haas, F. B.; Vanderstraeten, L.; Becker, D.; Lang, D. et al.; Vosolsobě, S.; Rombauts, S.; Wilhelmsson, P. K.I.; Janitza, P.; Kern, R.; Heyl, A.; Rümpler, F.; Villalobos, L. I. A. C.; Clay, J. M.; Skokan, R.; Toyoda, A.; Suzuki, Y.; Kagoshima, H.; Schijlen, E.; Tajeshwar, N.; Catarino, B.; Hetherington, A. J.; Saltykova, A.; Bonnot, C.; Breuninger, H.; Symeonidi, A.; Radhakrishnan, G. V.; Nieuwerburgh, F. V.; Deforce, D.; Chang, C.; Karol, K. G.; Hedrich, R.; Ulvskov, P.; Glöckner, G.; Delwiche, C. F.; Petrášek, J.; de Peer, Y. V.; Friml, J.; Beilby, M.; Dolan, L.; Kohara, Y.; Sugano, S.; Fujiyama, A.; Delaux, P.-M.; Quint, M.; Theißen, G.; Hagemann, M.; Harholt, J.; Dunand, C.; Zachgo, S.; Langdale, J.; Maumus, F.; Straeten, D. V. D.; Gould, S. B.; Rensing, S. A.: The Chara Genome: secondary complexity and implications for plant terrestrialization. Cell 174 (2), pp. 448 - 468 (2018)

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Bons, E.; Bertels, F.; Regoes, R. R.: Estimating the mutational fitness effects distribution during early HIV infection. Virus Evolution 4 (2), vey029 (2018)

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Drukewitz, S. H.; Fuhrmann, N.; Blanke, A.; Undheim, E.; von Reumont, B. M.: A dipteran's sucker punch: Diverse venom composition of the robber flies. Toxicon 149, p. 99 - 99 (2018)

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Graspeuntner, S.; Waschina, S.; Künzel, S.; Twisselmann, N.; Rausch, T. K.; Cloppenborg-Schmidt, K.; Zimmermann, J.; Viemann, D.; Herting, E.; Göpel, W. et al.; Baines, J. F.; Kaleta, C.; Rupp, J.; Härtel, C.; Pagel, J.: Gut dysbiosis with Bacilli dominance and accumulation of fermentation products precedes late-onset sepsis in preterm infants. Clinical Infectious Diseases 69 (2), pp. 268 - 277 (2018)

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Lange, V.; M., P. A.; Joireman, J.; Milinski, M.: Climate change: what psychology can offer in terms of insights and solutions. Current Directions in Psychological Science 27 (4), pp. 269 - 274 (2018)

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Skrabar, N.; Turner, L.; Pallares, L. F.; Harr, B.; Tautz, D.: Using the Mus musculus hybrid zone to assess covariation and genetic architecture of limb bone lengths. Molecular Ecology Resources 18 (4), pp. 908 - 921 (2018)

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Czypionka, T.; Goedbloed, D. J.; Steinfartz, S.; Nolte, A. W.: Plasticity and evolutionary divergence in gene expression associated with alternative habitat use in larvae of the European Fire Salamander. Molecular Ecology 27 (12), pp. 2698 - 2713 (2018)

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Straub, C.; Colombi, E.; Li, L.; Huang, H.; Templeton, M. D.; McCann, H. C.; Rainey, P. B.: The ecological genetics of Pseudomonas syringae from kiwifruit leaves. Environmental Microbiology 20 (6), pp. 2066 - 2084 (2018)

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Barbosa, C.; Beardmore, R.; Schulenburg, H.; Jansen, G.: Antibiotic combination efficacy (ACE) networks for a Pseudomonas aeruginosa model. PLoS Biology 16 (4), e2004356 (2018)

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Della Penna, A.; Trull, T. W.; Wotherspoon, S.; De Monte, S.; Johnson, C. R.; d'Ovidio, F.: Mesoscale variability of conditions favoring an iron-induced diatom bloom downstream of the Kerguelen Plateau. Journal of Geophysical Research: Oceans 123 (5), pp. 3355 - 3367 (2018)

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Hafer, N.: Differences between populations in host manipulation by the tapeworm Schistocephalus solidus – is there local adaptation? Parasitology 145 (6), pp. 762 - 769 (2018)

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Hadizadeh, F.; Bonfiglio, F.; Belheouane, M.; Vallier, M.; Sauer, S.; Bang, C.; Bujanda, L.; Andreasson, A.; Agreus, L.; Engstrand, L. et al.; Talley, N. J.; Rafter, J.; Baines, J. F.; Walter, S.; Franke, A.; D'Amato, M.: Faecal microbiota composition associates with abdominal pain in the general population. Gut 67 (4), pp. 778 - 779 (2018)

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Janzen, T.; Nolte, A. W.; Traulsen, A.: The breakdown of genomic ancestry blocks in hybrid lineages given a finite number of recombination sites. Evolution 72 (4), pp. 735 - 750 (2018)

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Linnenbrink, M.; Teschke, M.; Montero, I.; Vallier, M.; Tautz, D.: Meta-populational demes constitute a reservoir for large MHC allele diversity in wild house mice (Mus musculus). Frontiers in Zoology 15, 15 (2018)

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Schirrmann, M. K.; Zoller, S.; Croll, D.; Stukenbrock, E. H.; Leuchtmann, A.; Fior, S.: Genomewide signatures of selection in Epichloë reveal candidate genes for host specialization. Molecular Ecology 27 (15), pp. 3070 - 3086 (2018)

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Sanchez, E.; Küpfer, E.; Goedbloed, D. J.; Nolte, A. W.; Lüddecke, T.; Schulz, S.; Vences, M.; Steinfartz, S.: Morphological and transcriptomic analyses reveal three discrete primary stages of postembryonic development in the common fire salamander, Salamandra salamandra. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution 330 (2), pp. 96 - 108 (2018)

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Delmore, K. E.; Lugo Ramos, J. S.; Doren, B. M.; Lundberg, M.; Bensch, S.; Irwin, D. E.; Liedvogel, M.: Comparative analysis examining patterns of genomic differentiation across multiple episodes of population divergence in birds. Evolution Letters 2 (2), pp. 76 - 87 (2018)

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Schulenburg, H.: Infection models: novel potato blight-like pathogens in worms. Current Biology 28 (6), pp. R273 - R275 (2018)

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Stukenbrock, E. H.; Dutheil, J. Y.: Fine-scale recombination maps of fungal plant pathogens reveal dynamic recombination landscapes and intragenic hotspots. Genetics 208 (3), pp. 1209 - 1229 (2018)

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Østbye, K.; Taugbøl, A.; Ravinet, M.; Harrod, C.; Pettersen, R. A.; Bernatchez, L.; Vøllestad, L. A.: Ongoing niche differentiation under high gene flow in a polymorphic brackish water threespine stickleback (Gasterosteus aculeatus) population. BMC Evolutionary Biology 18, 14 (2018)

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Lenz, T. L.: Adaptive value of novel MHC immune gene variants. Proceedings of the National Academy of Sciences of the United States of America 115 (7), pp. 1414 - 1416 (2018)

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Abou Chakra, M.; Bumann, S.; Schenk, H.; Oschlies, A.; Traulsen, A.: Immediate action is the best strategy when facing uncertain climate change. Nature Communications 9, 2566 (2018)

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Barroso, G. V.; Puzovic, N.; Dutheil, J. Y.: The evolution of gene-specific transcriptional noise is driven by selection at the pathway level. Genetics 208 (1), pp. 173 - 189 (2018)

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Bekpen, C.; Xie, C.; Nebel, A.; Tautz, D.: Involvement of SPATA31 copy number variable genes in human lifespan. Aging 10 (4), pp. 674 - 688 (2018)

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Bekpen, C.; Xie, C.; Tautz, D.: Dealing with the adaptive immune system during de novo evolution of genes from intergenic sequences. BMC Evolutionary Biology 18, 121 (2018)

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Böttcher, M. A.; Dingli, D.; Werner, B.; Traulsen, A.: Replicative cellular age distributions in compartmentalized tissues. Interface: Journal of the Royal Society 15 (145), 20180272 (2018)

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Böttcher, M. A.; Held-Feindt, J.; Synowitz, M.; Lucius, R.; Traulsen, A.; Hattermann, K.: Modeling treatment-dependent glioma growth including a dormant tumor cell subpopulation. BMC Cancer 18, 376 (2018)

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Boynton, P. J.; Janzen, T.; Greig, D.: Modeling the contributions of chromosome segregation errors and aneuploidy to Saccharomyces hybrid sterility. Yeast 35 (1), pp. 85 - 98 (2018)

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Braun, B.; Künzel, S.; Schröder, J.; Szewzyk, U.: Draft genome sequence of actinobacterial strain Kineosporia sp. R_H_3, a neutrophilic iron-depositing bacterium. Microbiology Resource Announcement 6 (15), e00335-18 (2018)

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Braun, B.; Künzel, S.; Szewzyk, U.: Draft genome sequence of strain B 225, an iron-depositing isolate of the genus Novosphingobium. Genome Announcements 6 (15), e00325-18 (2018)

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Brown, J. W.; Caetano-Anollés, D.; Catanho, M.; Gribkova, E.; Ryckman, N.; Tian, K.; Voloshin, M.; Gillette, R.: Implementing goal-directed foraging decisions of a simpler nervous system in simulation. eNeuro 5 (1), e0400-17.2018 (2018)

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Caetano-Anollés, D.; Caetano-Anollés, K.; Caetano-Anollés, G.: Evolution of macromolecular structure: a 'double tale' of biological accretion and diversification. Science Progress 101 (4), pp. 360 - 383 (2018)

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Caetano-Anollés, K.; Caetano-Anollés, D.; Nasir, A.; Kim, K. M.; Caetano-Anollés, G.: Order and polarity in character state transformation models that root the tree of life. Biochimie 149, pp. 135 - 136 (2018)

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Coghlan, A.; Tyagi, R.; Cotton, J. A.; Holroyd, N.; Rosa, B. A.; Tsai, I. J.; Laetsch, D. R.; Beech, R. N.; Day, T. A.; Hallsworth-Pepin, K. et al.; Ke, H.-M.; Kuo, T.-H.; Lee, T. J.; Martin, J.; Maizels, R. M.; Mutowo, P.; Ozersky, P.; Parkinson, J.; Reid, A. J.; Rawlings, N. D.; Ribeiro, D. M.; Swapna, L. S.; Stanley, E.; Taylor, D. W.; Wheeler, N. J.; Zamanian, M.; Zhang, X.; Allan, F.; Allen, J. E.; Asano, K.; Babayan, S. A.; Bah, G.; Beasley, H.; Bennett, H. M.; Bisset, S. A.; Castillo, E.; Cook, J.; Cooper, P. J.; Cruz-Bustos, T.; Cuéllar, C.; Devaney, E.; Doyle, S. R.; Eberhard, M. L.; Emery, A.; Eom, K. S.; Gilleard, J. S.; Gordon, D.; Harcus, Y.; Harsha, B.; Hawdon, J. M.; Hill, D. E.; Hodgkinson, J.; Horák, P.; Howe, K. L.; Huckvale, T.; Kalbe, M.; Kaur, G.; Kikuchi, T.; Koutsovoulos, G.; Kumar, S.; Leach, A. R.; Lomax, J.; Makepeace, B.; Matthews, J. B.; Muro, A.; O’Boyle, N. M.; Olson, P. D.; Osuna, A.; Partono, F.; Pfarr, K.; Rinaldi, G.; Foronda, P.; Rollinson, D.; Samblas, M. G.; Sato, H.; Schnyder, M.; Scholz, T.; Shafie, M.; Tanya, V. N.; Toledo, R.; Tracey, A.; Urban, J. F.; Wang, L.-C.; Zarlenga, D.; Blaxter, M. L.; Mitreva, M.; Berriman, M.; Consortium, I. H. G.: Comparative genomics of the major parasitic worms. Nature Genetics 51, pp. 163 - 174 (2018)

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Czuppon, P.; Pfaffelhuber, P.: Limits of noise for autoregulated gene expression. Journal of Mathematical Biology 77 (4), pp. 1153 - 1191 (2018)

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Dool, S. E.; Künzel, S.; Haase, M.; Picker, M. D.; Eberhard, M. J. B.: Variable molecular markers for the order Mantophasmatodea (Insecta). Journal of Heredity 109 (4), pp. 477 - 483 (2018)

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Drukewitz, S. H.; Fuhrmann, N.; Undheim, E. A. B.; Blanke, A.; Giribaldi, J.; Mary, R.; Laconde, G.; Dutertre, S.; von Reumont, B. M.: A dipteran’s novel sucker punch: Evolution of arthropod atypical venom with a neurotoxic component in robber flies (asilidae, diptera). Toxins 10 (1), 29 (2018)

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Feurtey, A.; Stukenbrock, E. H.: Interspecific gene exchange as a driver of adaptive evolution in fungi. Annual Review of Microbiology 72 (1), pp. 377 - 398 (2018)

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Frickel, J.; Feulner, P. G.D.; Karakoc, E.; Becks, L.: Population size changes and selection drive patterns of parallel evolution in a host-virus system. Nature Communications 9, 1706 (2018)

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Giaimo, S.; Li, X.-Y.; Traulsen, A.; Baudisch, A.: Evolution of fixed demographic heterogeneity from a game of stable coexistence. Demographic Research 38 (1), pp. 197 - 226 (2018)

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Graspeuntner, S.; Bohlmann, M. K.; Gillmann, K.; Speer, R.; Kuenzel, S.; Mark, H.; Hoellen, F.; Lettau, R.; Griesinger, G.; König, I. R. et al.; Baines, J. F.; Rupp, J.: Microbiota-based analysis reveals specific bacterial traits and a novel strategy for the diagnosis of infectious infertility. PLoS One 13 (1), e0191047 (2018)

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Graspeuntner, S.; Loeper, N.; Künzel, S.; Baines, J. F.; Rupp, J.: Selection of validated hypervariable regions is crucial in 16S-based microbiota studies of the female genital tract. Scientific Reports 8, 9678 (2018)

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Habig, M.; Kema, G. H. J.; Stukenbrock, E. H.: Meiotic drive of female-inherited supernumerary chromosomes in a pathogenic fungus. eLife 7, e40251 (2018)

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Henström, M.; Diekmann, L.; Bonfiglio, F.; Hadizadeh, F.; Kuech, E.-M.; von Köckritz-Blickwede, M.; Thingholm, L. B.; Zheng, T.; Assadi, G.; Dierks, C. et al.; Heine, M.; Philipp, U.; Distl, O.; Money, M. E.; Belheouane, M.; Heinsen, F.-A.; Rafter, J.; Nardone, G.; Cuomo, R.; Usai-Satta, P.; Galeazzi, F.; Neri, M.; Walter, S.; Simrén, M.; Karling, P.; Ohlsson, B.; Schmidt, P. T.; Lindberg, G.; Dlugosz, A.; Agreus, L.; Andreasson, A.; Mayer, E.; Baines, J. F.; Engstrand, L.; Portincasa, P.; Bellini, M.; Stanghellini, V.; Barbara, G.; Chang, L.; Camilleri, M.; Franke, A.; Naim, H. Y.; D'Amato, M.: Functional variants in the sucrase–isomaltase gene associate with increased risk of irritable bowel syndrome. Gut 67, pp. 263 - 270 (2018)

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Hiltunen, T.; Cairns, J.; Frickel, J.; Jalasvuori, M.; Laakso, J.; Kaitala, V.; Künzel, S.; Karakoc, E.; Becks, L.: Dual-stressor selection alters eco-evolutionary dynamics in experimental communities. Nature Ecology & Evolution 2 (12), pp. 1974 - 1981 (2018)

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Hirose, M.; Schilf, P.; Gupta, Y.; Zarse, K.; Künstner, A.; Fähnrich, A.; Busch, H.; Yin, J.; Wright, M. N.; Ziegler, A. et al.; Vallier, M.; Belheouane, M.; Baines, J. F.; Tautz, D.; Johann, K.; Oelkrug, R.; Mittag, J.; Lehnert, H.; Othman, A.; Jöhren, O.; Schwaninger, M.; Prehn, C.; Adamski, J.; Shima, K.; Rupp, J.; Häsler, R.; Fuellen, G.; Köhling, R.; Ristow, M.; Ibrahim, S. M.: Low-level mitochondrial heteroplasmy modulates DNA replication, glucose metabolism and lifespan in mice. Scientific Reports 8 (1), 5872 (2018)

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Horas, E. L.; Theodosiou, L.; Becks, L.: Why are algal viruses not always successful? Viruses 10 (9), 474 (2018)

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Imhoff, J. F.; Rahn, T.; Künzel, S.: Photosynthesis is widely distributed among Proteobacteria as demonstrated by the phylogeny of PufLM reaction center proteins. Frontiers in Microbiology 8, 2679 (2018)

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Imhoff, J. .; Rahn, T.; Künzel, S.; Neulinger, S. .: New insights into the metabolic potential of the phototrophic purple bacterium Rhodopila globiformis DSM 161T from its draft genome sequence and evidence for a vanadium-dependent nitrogenase. Archives of Microbiology 200 (6), pp. 847 - 857 (2018)

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Karve, S.M.; Bhave, D.; Dey, S.: Extent of adaptation is not limited by unpredictability of the environment in laboratory populations of Escherichia coli. Journal of Evolutionary Biology 31 (9), pp. 1420 - 1426 (2018)

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Krause-Kyora, B.; Nutsua, M.; Boehme, L.; Pierini, F.; Pedersen, D. D.; Kornell, S.-C.; Drichel, D.; Bonazzi, M.; Möbus, L.; Tarp, P. et al.; Susat, J.; Bosse, E.; Willburger, B.; Schmidt, A. H.; Sauter, J.; Franke, A.; Wittig, M.; Caliebe, A.; Nothnagel, M.; Schreiber, S.; Boldsen, J. L.; Lenz, T. L.; Nebel, A.: Ancient DNA study reveals HLA susceptibility locus for leprosy in medieval Europeans. Nature Communications 9, 1569 (2018)

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Lang, D.; Ullrich, K. K.; Murat, F.; Fuchs, J.; Jenkins, J.; Haas, F. B.; Piednoel, M.; Gundlach, H.; Bel, M. V.; Meyberg, R. et al.; Vives, C.; Morata, J.; Symeonidi, A.; Hiss, M.; Muchero, W.; Kamisugi, Y.; Saleh, O.; Blanc, G.; Decker, E. L.; van Gessel, N.; Grimwood, J.; Hayes, R. D.; Graham, S. W.; Gunter, L. E.; McDaniel, S. F.; Hoernstein, S. N.W.; Larsson, A.; Li, F.-W.; Perroud, P.-F.; Phillips, J.; Ranjan, P.; Rokshar, D. S.; Rothfels, C. J.; Schneider, L.; Shu, S.; Stevenson, D. W.; Thümmler, F.; Tillich, M.; Aguilar, J. C. V.; Widiez, T.; Wong, G. K.-S.; Wymore, A.; Zhang, Y.; Zimmer, A. D.; Quatrano, R. S.; Mayer, K. F.X.; Goodstein, D.; Casacuberta, J. M.; Vandepoele, K.; Reski, R.; Cuming, A. C.; Tuskan, G. A.; Maumus, F.; Salse, J.; Schmutz, J.; Rensing, S. A.: The Physcomitrella patens chromosome-scale assembly reveals moss genome structure and evolution. The Plant Journal 93 (3), pp. 515 - 533 (2018)

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Journal Article

Loong, S. K.; Che-Mat-Seri, N.-A.-A.; Abdulrazak, O.; Douadi, B.; Ahmad-Nasrah, S.-N.; Mohd-Zain, J. J. S.-N.; Abubakar, S.: Recovery of Bordetella bronchiseptica sequence type 82 and B. pseudohinzii from urban rats in Terengganu, Malaysia. Journal of Veterinary Medical Science 80 (1), pp. 77 - 84 (2018)

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publisher-version

Journal Article

Maixner, F.; Turaev, D.; Cazenave-Gassiot, A.; Janko, M.; Krause-Kyora, B.; Hoopmann, M. R.; Kusebauch, U.; Sartain, M.; Guerriero, G.; O’Sullivan, N. et al.; Teasdale, M.; Cipollini, G.; Paladin, A.; Mattiangeli, V.; Samadelli, M.; Tecchiati, U.; Putzer, A.; Palazoglu, M.; Meissen, J.; Lösch, S.; Rausch, P.; Baines, J. F.; Kim, B. J.; An, H.-J.; Gostner, P.; Egarter-Vigl, E.; Malfertheiner, P.; Keller, A.; Stark, R. W.; Wenk, M.; Bishop, D.; Bradley, D. G.; Fiehn, O.; Engstrand, L.; Moritz, R. L.; Doble, P.; Franke, A.; Nebel, A.; Oeggl, K.; Rattei, T.; Grimm, R.; Zink, A.: The Iceman’s last meal consisted of fat, wild meat, and cereals. Current Biology 28, pp. 1 - e9 (2018)

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publisher-version

Journal Article

Mobley, K. B.; Morrongiello, J. R.; Warr, M.; Bray, D. J.; Wong, B. B.M.: Female ornamentation and the fecundity trade-off in a sex-role reversed pipefish. Ecology and Evolution 8 (18), pp. 9516 - 9525 (2018)

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publisher-version

Journal Article

Pan, W.-H.; Sommer, F.; Falk-Paulsen, M.; Ulas, T.; Best, P.; Fazio, A.; Kachroo, P.; Luzius, A.; Jentzsch, M.; Rehman, A. et al.; Müller, F.; Lengauer, T.; Walter, J.; Künzel, S.; Baines, J. F.; Schreiber, S.; Franke, A.; Schultze, J. L.; Backhed, F.; Rosenstiel, P.: Exposure to the gut microbiota drives distinct methylome and transcriptome changes in intestinal epithelial cells during postnatal development. Genome Medicine 10, 27 (2018)

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publisher-version

Journal Article

Park, H. J.; Jo, W. S.; Lee, S. H.; Kim, B. J.: Generalized gravity model for human migration. New Journal of Physics 20 (9), 093018 (2018)

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publisher-version

Journal Article

Perroud, P.-F.; Haas, F. B.; Hiss, M.; Ullrich, K. K.; Alboresi, A.; Amirebrahimi, M.; Barry, K.; Bassi, R.; Bonhomme, S.; Chen, H. et al.; Coates, J. C.; Fujita, T.; Guyon-Debast, A.; Lang, D.; Lin, J.; Lipzen, A.; Nogué, F.; Oliver, M. J.; de Léon, I. P.; Quatrano, R. S.; Rameau, C.; Reiss, B.; Reski, R.; Ricca, M.; Saidi, Y.; Sun, N.; Szövenyi, P.; Sreedasyam, A.; Grimwood, J.; Stacey, G.; Schmutz, J.; Rensing, a. S. A.: The Physcomitrella patens gene atlas project: large-scale RNA-seq based expression data. The Plant Journal 95 (1), pp. 168 - 182 (2018)

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Journal Article

Roemhild, R.; Gokhale, C. S.; Dirksen, P.; Blake, C.; Rosenstiel, P.; Traulsen, A.; Andersson, D. I.; Schulenburg, H.: Cellular hysteresis as a principle to maximize the efficacy of antibiotic therapy. Proceedings of the National Academy of Sciences of the United States of America 115 (39), pp. 9767 - 9772 (2018)

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publisher-version

Journal Article

Ruhlemann, M. C.; Degenhardta, F.; Thingholm, L. B.; Wang, J.; Skieceviciene, J.; Rausch, P.; Hov, J. R.; Lieb, W.; Karlsen, T. H.; Laudes, M. et al.; Baines, J. F.; Heinsen, F.-A.; Franke, A.: Application of the distance-based F test in an mGWAS investigating β diversity of intestinal microbiota identifies variants in SLC9A8 (NHE8) and 3 other loci. Gut Microbes 9 (1), pp. 68 - 75 (2018)

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publisher-version

Journal Article

Schmitz, J. F.; Ullrich, K. K.; Bornberg-Bauer, E.: Incipient de novo genes can evolve from frozen accidents that escaped rapid transcript turnover. Nature Ecology & Evolution 2 (10), pp. 1626 - 1632 (2018)

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Journal Article

Schweizer, G.; Münch, K.; Mannhaupt, G.; Schirawski, J.; Kahmann, R.; Dutheil, J. Y.: Positively selected effector genes and their contribution to virulence in the smut fungus Sporisorium reilianum. Genome Biology and Evolution 10 (2), pp. 629 - 645 (2018)

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publisher-version

Journal Article

Ser-Giacomi, E.; Zinger, L.; Malviya, S.; De Vargas, C.; Karsenti, E.; Bowler, C.; De Monte, S.: Ubiquitous abundance distribution of non-dominant plankton across the global ocean. Nature Ecology & Evolution 2 (8), pp. 1243 - 1249 (2018)

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Journal Article

Tautz, D.; Neme, R.: Reply to ‘No beneficial fitness effects of random peptides’. Nature Ecology & Evolution 2 (7), p. 1048 - 1048 (2018)

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Journal Article

Van Der Zee, J. R.; Walsh, G.; Mikembi, V. N. B.; Jonker, M. N.; Alexndre, M. P.; Sonnenberg, R.: Three new endemic Aphyosemion species (Cyprinodontiformes: Nothobranchiidae) from the Massif du Chaillu in the upper Louessé River system, Republic of the Congo. Zootaxa 4369 (1), pp. 63 - 92 (2018)

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Journal Article

Weston, D. J.; Turetsky, M. R.; Johnson, M. G.; Granath, G.; Lindo, Z.; Belyea, L. R.; Rice, S. K.; Hanson, D. T.; Engelhardt, K. A. M.; Schmutz, J. et al.; Dorrepaal, E.; Euskirchen, E. S.; Stenøien, H. K.; Szövényi, P.; Jackson, M.; Piatkowski, B. T.; Muchero, W.; Norby, R. J.; Kostka, J. E.; Glass, J. B.; Rydin, H.; Limpens, J.; Tuittila, E.-S.; Ullrich, K. K.; Carrell, A.; Benscoter, B. W.; Chen, J.-G.; Oke, T. A.; Nilsson, M. B.; Ranjan, P.; Jacobson, D.; Lilleskov, E. A.; Clymo, R. S.; Shaw, A. J.: The Sphagnome Project: enabling ecological and evolutionary insights through a genus-level sequencing project. New Phytologist 217 (1), pp. 16 - 25 (2018)

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Book (1)

2018

Book

Heitman, J.; Howlett, B. J.; Crous, P. W.; Stukenbrock, E. H.; James, T. Y.; Gow, N. A. R. (Eds.): The fungal kingdom. ASM Press, Washington DC, USA (2018)

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Book Chapter (5)

2018

Book Chapter

Doms, S.; Hermes, B.-M.; Baines, J. F.: Evolutionary perspectives on the human Gut Microbiome. In: The Gut Microbiome in Health and Disease, pp. 65 - 78 (Ed. Haller, D.). Springer, Heidelberg (2018)

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Book Chapter

Ibrahim, S.; Belheouane, M.: Methods for microbiota analysis: sample collection and laboratory methods. In: The Microbiome in Rheumatic Diseases and Infection, pp. 13 - 27 (Eds. Ragab, G.; Atkinson, T. P.). Springer International Publishing, Cham (2018)

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Book Chapter

Liedvogel, M.; Delmore, K.: (Micro)evolutionary changes and the evolutionary potential of bird migration. In: Bird Species: How They Arise, Modify and Vanish, pp. 109 - 127 (Ed. Tietze, D. T.). Springer International Publishing, Cham (2018)

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publisher-version

Book Chapter

Rausch, P.; Künstner, A.: Analytic methods in microbiome studies. In: The Microbiome in Rheumatic Diseases and Infection, pp. 29 - 42 (Eds. Ragab, G.; Atkinson, T. P.; Stoll, M. L.). Springer International Publishing, Cham (2018)

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Book Chapter

Traulsen, A.: Die Evolution und der Zusammenbruch von Kooperation: Wie Einzelne das Gemeinwohl gefährden können. In: Rationale Entscheidungen unter Unsicherheit, pp. 59 - 68. De Gruyter, Berlin (2018)

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publisher-version

Conference Paper (1)

2018

Conference Paper

Vallier, M.; Chamaillard, M.; Ferreira, S.; Menegatti, S.; Bianchi, E.; Rogge, L.; Dougados, M.; Miceli-Richard, C.: SAT0265 The response to tnf-blockers treatment of spa patients is influenced by the interplay between hla-b27 and gut microbiota composition at baseline. Annual European Congress of Rheumatology, Amsterdam, Netherlands, June 13, 2018 - June 16, 2018. Annals of the Rheumatic Diseases 77 (Suppl 2), p. 996 - 996 (2018)

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Conference Report (5)

2018

Conference Report

Miller, M.; Rottschaefer, S.; Persoons, A.; Hirsch, C.; Saunders, D.; Stukenbrock, E. H.; Kianian, S.; Figueroa, M.: Genome architecture and virulence gene dynamics in oat crown rust populations. International Congress of Plant Pathology (ICPP), Boston, July 29, 2018 - August 03, 2018. Phytopathology 108 (10), Supplement S1 Ed., pp. 104 - 105 (2018)

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Conference Report

Moeller, M.; Schotanus, K.; Soyer, J.; Freitag, M.; Stukenbrock, E. H.: Zymoseptoria tritici histone modifications distinguish core and accessory chromosomes and play an important role in genome stability. International Congress of Plant Pathology (ICPP), Boston, July 29, 2018 - August 03, 2018. Phytopathology 108 (10), Supplement S1 Ed., pp. 282 - 283 (2018)

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