Park, H. J.; Gokhale, C. S.; Bertels, F.: How sequence populations persist inside bacterial genomes. Genetics 217 (7), iyab027 (2021)

Bertels, F.; Leemann, C.; Metzner, K. J.; Regoes, R.: Parallel evolution of HIV-1 in a long-term experiment. Molecular Biology and Evolution 36 (11), S. 2400 - 2414 (2019)

Hugoson, E.; Lam, W. T.; Guy, L.: miComplete: weighted quality evaluation of assembled microbial genomes. Bioinformatics, btz664 (2019)

Gallie, J.; Bertels, F.; Remigi, P.; Ferguson, G. C.; Nestmann, S.; Rainey, P. B.: Repeated phenotypic evolution by different genetic routes in Pseudomonas fluorescens SBW25. Molecular Biology and Evolution 36 (5), S. 1071 - 1085 (2019)

Bons, E.; Bertels, F.; Regoes, R. R.: Estimating the mutational fitness effects distribution during early HIV infection. Virus Evolution 4 (2), vey029 (2018)

Bertels, F.; Metzner, K. J.; Regoes, R. R.: Convergent evolution as an indicator for selection during acute HIV-1 infection. bioRxiv, 168260, ver. 4 peer-reviewed and recommended by PCI Evolutionary Biology (2018)

Bertels, F.; Gallie, J.; Rainey, P. B.: Identification and characterization of domesticated bacterial transposases. Genome Biology and Evolution 9 (8), S. 2110 - 2121 (2017)

Bertels, F.; Gokhale, C. S.; Traulsen, A.: Discovering complete quasispecies in bacterial genomes. Genetics 206 (4), S. 2149 - 2157 (2017)

Zeng, Q.; Wang, J.; Bertels, F.; Giordano, P. R.; Chilvers, M. I.; Huntley, R. B.; Vargas, J. M.; Sundin, G. W.; Jacobs, J. L.; Yang, C.-H.: Recombination of virulence genes in divergent acidovorax avenae strains that infect a common host. Molecular Plant-Microbe Interactions 30 (10), S. 813 - 828 (2017)

Sontag, M.: Studying the function of domesticated transposases in bacterial genomes. Master, Christian-Albrechts-Universität zu Kiel, Kiel (2019)

van Dijk, B.; Bertels, F.; Stolk, L.; Takeuchi, N.; Rainey, P. B.: Transposable elements drive the evolution of genome streamlining. bioRxiv (2021)