Komluski, J.; Stukenbrock, E. H.; Habig, M.: Non-Mendelian transmission of accessory chromosomes in fungi. Chromosome Research 30, S. 241 - 253 (2022)

Guerra‐García, A.; Rojas-Barrera, I. C.; Ross‐Ibarra, J.; Papa, R.; Piñero, D.: The genomic signature of wild‐to‐crop introgression during the domestication of scarlet runner bean (Phaseolus coccineus L.). Evolution Letters 6 (4), S. 295 - 307 (2022)

Yuan, Z.; Wu, Q.; Xu, L.; Druzhinina, I. S.; Stukenbrock, E. H.; Nieuwenhuis, B. P. S.; Zhong, Z.; Liu, Z.-J.; Wang, X.; Cai, F. et al.; Kubicek, C. P.; Shan, X.; Wang, J.; Shi, G.; Peng, L.; Martin, F. M.: Genomic landscape of a relict fir-associated fungus reveals rapid convergent adaptation towards endophytism. The ISME Journal 16, S. 1294 - 1305 (2022)

Hassani, M. A.; Oppong-Danquah, E.; Feurtey, A.; Tasdemir, D.; Stukenbrock, E. H.: Differential regulation and production of secondary metabolites among isolates of the fungal wheat pathogen Zymoseptoria tritici. Applied and Environmental Microbiology, aem.02296-21 (2022)

Alizadeh, A.; Javan-Nikkhah, M.; Nourmohammadi Nazarian, R.; Liu, F.; Zare, R.; Fotouhifar, K. B.; Stukenbrock, E. H.; Damm, U.: New species of Colletotrichum from wild Poaceae and Cyperaceae plants in Iran. Mycologia 114, S. 89 - 113 (2022)

Miller, M. E.; Nazareno, E. S.; Rottschaefer, S. M.; Riddle, J.; Dos Santos Pereira, D.; Li, F.; Nguyen-Phuc, H.; Henningsen, E. C.; Persoons, A.; Saunders, D. G. O. et al.; Stukenbrock, E. H.; Dodds, P. N.; Kianian, S. F.; Figueroa, M.: Increased virulence of Puccinia coronata f. sp.avenae populations through allele frequency changes at multiple putative Avr loci. PLoS Genetics 16 (12), e1009291 (2021)

Filatova, S.; Claassen, B.; Torres, G.; Krause-Kyora, B.; Stukenbrock, E. H.; Kirleis, W.: Toward an investigation of diversity and cultivation of rye (Secale cereale ssp. cereale L.) in Germany: methodological insights and first results from early modern plant material. Agronomy 11, 2451 (2021)

Habig, M.; Lorrain, C.; Feurtey, A.; Komluski, J.: Epigenetic modifications affect the rate of spontaneous mutations in a pathogenic fungus. Nature Communications 12, 5869 (2021)

Spanner, R.; Taliadoros, D.; Richards, J.; Rivera-Varas, V.; Neubauer, J.; Natwick, M.; Hamilton, O.; Vaghefi, N.; Pethybridge, S.; Secor, G. A. et al.; Friesen, T. L.; Stukenbrock, E. H.; Bolton, M. D.: Genome-wide association and selective sweep studies reveal the complex genetic architecture of DMI fungicide resistance in Cercospora beticola. Genome Biology and Evolution 13 (9), evab209 (2021)

Pereira, D.; Oggenfuss, U.; McDonald, B. A.; Crol, D.: Population genomics of transposable element activation in the highly repressive genome of an agricultural pathogen. Microbial Genomics 7, 000540 (2021)

Boynton, P. J.; Wloch-Salamon, D.; Landermann, D.; Stukenbrock, E. H.: Forest Saccharomyces paradoxus are robust to seasonal biotic and abiotic changes. Ecology and Evolution 11 (11), S. 6604 - 6619 (2021)

Lorrain, C.; Feurtey, A.; Möller, M.; Haueisen, J.; Stukenbrock, E. H.: Dynamics of transposable elements in recently diverged fungal pathogens: lineage-specific transposable element content and efficiency of genome defences. G3: Genes, Genomes, Genetics 11 (4), jkab068 (2021)

Soluch, R.; Hülter, N. F.; Romero Picazo, D.; Özkurt, E.; Stukenbrock, E. H.; Dagan, T.: Colonization dynamics of Pantoea agglomeransin the wheat root habitat. Environmental Microbiology 23, S. 2260 - 2273 (2021)

Möller, M.; Habig, M.; Lorrain, C.; Feurtey, A.; Haueisen, J.; Fagundes, W. C.; Alizadeh, A.; Freitag, M.; Stukenbrock, E. H.: Recent loss of the Dim2 DNA methyltransferase decreases mutation rate in repeats and changes evolutionary trajectory in a fungal pathogen. PLoS Genetics 17 (3), e1009448 (2021)

Croll, D.; Crous, P.W.; Pereira, D.; Mordecai, E.A.; McDonald, B.A.; Brunner, P.C.: Genome-scale phylogenies reveal relationships among Parastagonospora species infecting domesticated and wild grasses. Persoonia 46, S. 116 - 128 (2021)

Habig, M.; Schotanus, K.; Hufnagel, K.; Happel, P.; Stukenbrock, E. H.: Ago1 Affects the Virulence of the Fungal Plant Pathogen Zymoseptoria tritici. Genes 12 (7), 1011 (2021)

Ebert, M. K.; Rangel, L. I.; Spanner, R. E.; Taliadoros, D.; Wang, X.; Friesen, T. L.; de Jonge, R.; Neubauer, J. D.; Secor, G. A.; Thomma, B. P. H. J. et al.; Stukenbrock, E. H.; Bolton, M. D.: Identification and characterization of Cercospora beticola necrosis-inducing effector CbNip1. Molecular Plant Pathology 00, S. 1 - 16 (2020)

Özkurt, E.; Hassani, M. A.; Sesiz, U.; Künzel, S.; Dagan, T.; Özkan, H.; Stukenbrock, E. H.: Seed-derived microbial colonization of wild emmer and domesticated bread wheat (Triticum dicoccoidesandt. Aestivum) seedlings shows pronounced differences in overall diversity and composition. mBio 11 (6), e02637-20 (2020)

Vasighzadeh, A.; Sharifnabi, B.; Javan-Nikkhah, M.; Seifollahi, E.; Landermann-Habetha, D.; Feurtey, A.; Stukenbrock, E. H.: Population genetic structure of four regional populations of the barley pathogen Pyrenophora teres f. maculata in Iran is characterized by high genetic diversity and sexual recombination. Plant Pathology 00, S. 1 - 10 (2020)

Petters-Vandresen, D. A. L.; Janoski Rossi, B.; Groenewald, J. Z.; Crouse, P. W.; Machado, M. A.; Stukenbrock, E. H.; Glienke, C.: Mating-type locus rearrangements and shifts in thallism states in Citrus-associated Phyllosticta species. Fungal Genetics and Biology 144, 103444 (2020)