Publications of Eva H. Stukenbrock

Journal Article (58)

Journal Article
Boynton, P.; Kowallik, V.; Landermann, D.; Stukenbrock, E. H.: Quantifying the efficiency and biases of forest Saccharomyces sampling strategies. Yeast 0 (0), pp. 1 - 12 (2019)
Journal Article
Haueisen, J.; Möller, M.; Eschenbrenner, C. J.; Grandaubert, J.; Seybold, H.; Adamiak, H.; Stukenbrock, E. H.: Highly flexible infection programs in a specialized wheat pathogen. Ecology and Evolution 9 (1), pp. 275 - 294 (2019)
Journal Article
Richards, J. K.; Stukenbrock, E. H.; Carpenter, J.; Liu, Z.; Cowger, C.; Faris, J. D.; Friesen, T. L.: Local adaptation drives the diversification of effectors in the fungal wheat pathogen Parastagonospora nodorum in the United States. PLoS Genetics 15 (10), e1008223 (2019)
Journal Article
Möller, M.; Habig, M.; Freitag, M.; Stukenbrock, E. H.: Extraordinary genome instability and widespread chromosome rearrangements during vegetative growth. Genetics 210 (2), pp. 517 - 529 (2018)
Journal Article
Schirrmann, M. K.; Zoller, S.; Croll, D.; Stukenbrock, E. H.; Leuchtmann, A.; Fior, S.: Genomewide signatures of selection in Epichloë reveal candidate genes for host specialization. Molecular Ecology 27 (15), pp. 3070 - 3086 (2018)
Journal Article
Stukenbrock, E. H.; Dutheil, J. Y.: Fine-scale recombination maps of fungal plant pathogens reveal dynamic recombination landscapes and intragenic hotspots. Genetics 208 (3), pp. 1209 - 1229 (2018)
Journal Article
Feurtey, A.; Stukenbrock, E. H.: Interspecific gene exchange as a driver of adaptive evolution in fungi. Annual Review of Microbiology 72 (1), pp. 377 - 398 (2018)
Journal Article
Habig, M.; Kema, G. H. J.; Stukenbrock, E. H.: Meiotic drive of female-inherited supernumerary chromosomes in a pathogenic fungus. eLife 7, e40251 (2018)
Journal Article
Habig, M.; Quade, J.; Stukenbrock, E. H.: Forward genetics approach reveals host genotype-dependent importance of accessory chromosomes in the fungal wheat pathogen Zymoseptoria tritici. mBio 8 (6), e01919-17 (2017)
Journal Article
Möller, M.; Stukenbrock, E. H.: Evolution and genome architecture in fungal plant pathogens. Nature Reviews Microbiology 15 (12), pp. 756 - 771 (2017)
Journal Article
McDonald, B.A.; Stukenbrock, E. H.: Rapid emergence of pathogens in agro-ecosystems: global threats to agricultural sustainability and food security. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 371 (1709) (2016)
Journal Article
Haueisen, J.; Stukenbrock, E. H.: Life cycle specialization of filamentous pathogens - colonization and reproduction in plant tissues. Current Opinion in Microbiology 32, pp. 31 - 37 (2016)
Journal Article
Stukenbrock, E. H.: The role of hybridization in the evolution and emergence of new fungal plant pathogens. Phytopathology 106 (2), pp. 104 - 112 (2016)
Journal Article
Stukenbrock, E. H.: Hybridization speeds up the emergence and evolution of a new pathogen species. Nature Genetics 48 (2) (2016)
Journal Article
Schotanus, K.; Soyer, J. L.; Connolly, L. R.; Grandaubert, J.; Happel, P.; Smith, K. M.; Freitag, M.; Stukenbrock, E. H.: Histone modifications rather than the novel regional centromeres of Zymoseptoria tritici distinguish core and accessory chromosomes. Epigenetics & Chromatin 8 (1), 41 (2015)
Journal Article
Poppe, S.; Dorsheimer, L.; Happel, P.; Stukenbrock, E. H.: Rapidly Evolving Genes Are Key Players in Host specialization and virulence of the fungal wheat pathogen Zymoseptoria tritici (Mycosphaerella graminicola). PLoS Pathogens 11 (7), e1005055 (2015)
Journal Article
Grandaubert, J.; Bhattacharyya, A.; Stukenbrock, E. H.: RNA-seq-Based gene annotation and comparative genomics of four fungal grass pathogens in the genus Zymoseptoria identify novel orphan genes and species-specific invasions of transposable elements. G3: Genes, Genomes, Genetics 5 (7), pp. 1323 - 1333 (2015)
Journal Article
Soyer, J. L.; Möller, M.; Schotanus, K.; Connolly, L. R.; Galazka, J. M.; Freitag, M.; Stukenbrock, E. H.: Chromatin analyses of Zymoseptoria tritici: methods for chromatin immunoprecipitation followed by high-throughput sequencing (ChIP-seq). Fungal Genetics and Biology 79, YFGBI 2798, pp. 63 - 70 (2015)

Book (1)

Heitman, J.; Howlett, B. J.; Crous, P. W.; Stukenbrock, E. H.; James, T. Y.; Gow, N. A. R. (Eds.): The fungal kingdom. ASM Press, Washington DC, USA (2018)

Book Chapter (1)

Book Chapter
Eschenbrenner, C. J.; Feurtey, A.; Stukenbrock, E. H.: Population genomics of fungal plant pathogens and the analyses of rapidly evolving genome compartments. In: Statistical Population Genomics, Vol. 2090, pp. 337 - 355 (Ed. Dutheil, J. Y.). Humana, New York (2020)
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